RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 YWHAEP62258 255 aaKnown RBP22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 VWA5B1Q5TIE3 1220 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 TRMT10BQ6PF06 316 aaKnown RBP22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 CHPT1Q8WUD6 406 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 SREK1Q8WXA9 508 aaKnown RBP22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 HSPH1Q92598 858 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 CDKL2Q92772 493 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 DOK1Q99704 481 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 PAAF1Q9BRP4 392 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 LHX5Q9H2C1 402 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 LIN28AQ9H9Z2 209 aaKnown RBP22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 TCF7L2Q9NQB0 619 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 TBC1D13Q9NVG8 400 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 IPO11Q9UI26 975 aaKnown RBP22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 TGM2P21980 687 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 IGFBP6P24592 240 aaPredicted RBP22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 NDST2P52849 883 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 CEACAM7Q14002 265 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 ZBTB6Q15916 424 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 SNX32Q86XE0 403 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 DUS3LQ96G46 650 aaKnown RBP22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 SLC38A7Q9NVC3 462 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 AP4S1Q9Y587 144 aa22.19■■□□□ 1.14
POLR2J3-220ENST00000613744 C7orf72A4D263 438 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 PPEF2O14830 753 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 KCNN4O15554 427 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 DDHD2O94830 711 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 ALDOAP04075 364 aaKnown RBP22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 ZNF699Q32M78 642 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 CYP4A22Q5TCH4 519 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 TMEM53Q6P2H8 277 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 DCLRE1AQ6PJP8 1040 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 JOSD2Q8TAC2 188 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 URGCPQ8TCY9 931 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 C17orf50Q8WW18 174 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 ZBED2Q9BTP6 218 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 CALN1Q9BXU9 219 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 CAAP1Q9H8G2 361 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 SPATA7Q9P0W8 599 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 TDRD15B5MCY1 1934 aaKnown RBP22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 TPP1O14773 563 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 XPO1O14980 1071 aaKnown RBP22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 RNASEH2AO75792 299 aaKnown RBP22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 PRKCGP05129 697 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 NRLP54845 237 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 C21orf59P57076 290 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 MS4A2Q01362 244 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 NIPAL4Q0D2K0 466 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 ATG14Q6ZNE5 492 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 SCAIQ8N9R8 606 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 BEST2Q8NFU1 509 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 TNIP2Q8NFZ5 429 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 C12orf43Q96C57 262 aaKnown RBP22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 PLEKHA8Q96JA3 519 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 YME1L1Q96TA2 773 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 SELENONQ9NZV5 590 aa22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 UBQLN1Q9UMX0 589 aaKnown RBP22.18■■□□□ 1.14
POLR2J3-220ENST00000613744 GRXCR1A8MXD5 290 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 TRIM38O00635 465 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 KLHL41O60662 606 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 TOP3BO95985 862 aaKnown RBP22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 APRTP07741 180 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 EPHA3P29320 983 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 MIPP30301 263 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 ARRB2P32121 409 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 PBX3P40426 434 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 PSMD8P48556 350 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 FAM109BQ6ICB4 259 aaPredicted RBP22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 SCARA5Q6ZMJ2 495 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 NT5DC4Q86YG4 428 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 CLVS1Q8IUQ0 354 aaPredicted RBP22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 FIBCD1Q8N539 461 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 CNTD1Q8N815 330 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 UHRF1Q96T88 793 aaPredicted RBP22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 GDF15Q99988 308 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 TMEM79Q9BSE2 394 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 SLC4A5Q9BY07 1137 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 EFCAB1Q9HAE3 211 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 ASNSD1Q9NWL6 643 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 NXF1Q9UBU9 619 aaKnown RBP22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 USP18Q9UMW8 372 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 DERAQ9Y315 318 aa22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 PDCD11Q14690 1871 aaKnown RBP22.17■■□□□ 1.14
POLR2J3-220ENST00000613744 TRIM64A6NGJ6 449 aa22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 TRIM64BA6NI03 449 aa22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 ASS1P00966 412 aaKnown RBP22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 INHBBP09529 407 aa22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 CCR3P51677 355 aa22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 RABGGTBP53611 331 aa22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 SLC9B1Q4ZJI4 515 aa22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 ITPRIPL1Q6GPH6 555 aa22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 THAP11Q96EK4 314 aa22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 KLHL32Q96NJ5 620 aa22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 PAIP1Q9H074 479 aaKnown RBP22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 ZNF385DQ9H6B1 395 aa22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 COQ10BQ9H8M1 238 aa22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 WDR41Q9HAD4 459 aa22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 PRDM16Q9HAZ2 1276 aa22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 B3GNT3Q9Y2A9 372 aa22.16■■□□□ 1.14
POLR2J3-220ENST00000613744 FNDC1Q4ZHG4 1894 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms