RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 HCAR3P49019 387 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 AFF3P51826 1226 aaKnown RBP12.84□□□□□ -0.35
CSTF1-208ENST00000613138 ATXN3P54252 364 aaPredicted RBP12.84□□□□□ -0.35
CSTF1-208ENST00000613138 CLDN2P57739 230 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 SNRPD1P62314 119 aaKnown RBP12.84□□□□□ -0.35
CSTF1-208ENST00000613138 SLC10A7Q0GE19 358 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 ZNF284Q2VY69 593 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 NCBP2-AS2Q69YL0 99 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 TMCO3Q6UWJ1 677 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 B4GALNT4Q76KP1 1039 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 CAMK1DQ8IU85 385 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 PGBD5Q8N414 524 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 PQLC3Q8N755 202 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 ACRBPQ8NEB7 543 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 FAM71BQ8TC56 605 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 RFFLQ8WZ73 363 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 GDAP1L1Q96MZ0 367 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 CALN1Q9BXU9 219 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 HDAC8Q9BY41 377 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 SP110Q9HB58 689 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 DYRK4Q9NR20 520 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 FADS3Q9Y5Q0 445 aa12.84□□□□□ -0.35
CSTF1-208ENST00000613138 SPAARA0A1B0GVQ0 90 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 ZSCAN5CA6NGD5 496 aaPredicted RBP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 C3orf70A6NLC5 250 aaPredicted RBP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 EIF3CLB5ME19 914 aaKnown RBP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 RAD51BO15315 384 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 SLC7A4O43246 635 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 SH3BP5O60239 455 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 OPHN1O60890 802 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 PALMO75781 387 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 POP4O95707 220 aaKnown RBP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 IGSF6O95976 241 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 TOP3BO95985 862 aaKnown RBP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 SYPP08247 313 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 TIMP2P16035 220 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 CTSKP43235 329 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 MAGEA1P43355 309 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 MARCKSL1P49006 195 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 NOVA1P51513 510 aaKnown RBP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 NEK3P51956 506 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 GEMIN4P57678 1058 aaKnown RBP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 MAXP61244 160 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 SLC10A2Q12908 348 aaPredicted RBP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 PTPRRQ15256 657 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 HADHQ16836 314 aaKnown RBP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 INO80DQ53TQ3 878 aaPredicted RBP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 ANKRD20A8PQ5CZ79 823 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 ZNF805Q5CZA5 627 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 N4BP2L1Q5TBK1 243 aaPredicted RBP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 FBXL19Q6PCT2 694 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 GDPD4Q6W3E5 623 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 ADAT2Q7Z6V5 191 aaKnown RBP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 TRIM69Q86WT6 500 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 HORMAD1Q86X24 394 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 SPATS2Q86XZ4 545 aaKnown RBP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 KCTD6Q8NC69 237 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 EIF3CQ99613 913 aaKnown RBP12.83□□□□□ -0.36
CSTF1-208ENST00000613138 BTBD3Q9Y2F9 522 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 PCDHA13Q9Y5I0 950 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 DUSP10Q9Y6W6 482 aa12.83□□□□□ -0.36
CSTF1-208ENST00000613138 GOLGA4Q13439 2230 aaKnown RBP12.82□□□□□ -0.36
CSTF1-208ENST00000613138 IGLON5A6NGN9 336 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 MAFKO60675 156 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 MTA2O94776 668 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 COMTP21964 271 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 KDELR1P24390 212 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 GRIA4P48058 902 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 RACK1P63244 317 aaKnown RBP12.82□□□□□ -0.36
CSTF1-208ENST00000613138 GBE1Q04446 702 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 IL10RBQ08334 325 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 IHHQ14623 411 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 SHBQ15464 509 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 TMEM259Q4ZIN3 620 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 TPRG1LQ5T0D9 272 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 ZFYVE27Q5T4F4 411 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 NPNTQ6UXI9 565 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 PIP4P1Q86T03 277 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 SRLQ86TD4 932 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 GATAD2AQ86YP4 633 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 TMEM139Q8IV31 216 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 PLPP6Q8IY26 295 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 PPP1R16AQ96I34 528 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 SMIM14Q96QK8 99 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 NCAPGQ9BPX3 1015 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 PREBQ9HCU5 417 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 DNAAF2Q9NVR5 837 aaKnown RBP12.82□□□□□ -0.36
CSTF1-208ENST00000613138 COQ6Q9Y2Z9 468 aa12.82□□□□□ -0.36
CSTF1-208ENST00000613138 A0A0U1RQS6 177 aa12.81□□□□□ -0.36
CSTF1-208ENST00000613138 LRRD1A4D1F6 860 aa12.81□□□□□ -0.36
CSTF1-208ENST00000613138 GOLGA8CPA6NN73 597 aa12.81□□□□□ -0.36
CSTF1-208ENST00000613138 MMP20O60882 483 aa12.81□□□□□ -0.36
CSTF1-208ENST00000613138 LCA5LO95447 670 aa12.81□□□□□ -0.36
CSTF1-208ENST00000613138 FECHP22830 423 aa12.81□□□□□ -0.36
CSTF1-208ENST00000613138 CD38P28907 300 aa12.81□□□□□ -0.36
CSTF1-208ENST00000613138 MAN1A1P33908 653 aa12.81□□□□□ -0.36
CSTF1-208ENST00000613138 NOP2P46087 812 aaKnown RBP12.81□□□□□ -0.36
CSTF1-208ENST00000613138 SCNN1BP51168 640 aa12.81□□□□□ -0.36
CSTF1-208ENST00000613138 LBRQ14739 615 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms