RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 SLC7A3Q8WY07 619 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 NSMCE2Q96MF7 247 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 METTL8Q9H825 291 aaKnown RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 METP08581 1390 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CYP27B1O15528 508 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 DNAJA2O60884 412 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CD2P06729 351 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 UBL4AP11441 157 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CD53P19397 219 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CES1P23141 567 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 GCKRQ14397 625 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 GRM2Q14416 872 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 SCYL2Q6P3W7 929 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 MAGEE2Q8TD90 523 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 PPP1R36Q96LQ0 422 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 COQ10BQ9H8M1 238 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 SETD4Q9NVD3 440 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 PPM1HQ9ULR3 514 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 COL5A2P05997 1499 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 GATCO43716 136 aaKnown RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 PPM1BO75688 479 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CYP3A4P08684 503 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 RAB3AP20336 220 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 RPL35P42766 123 aaKnown RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 BCAR1P56945 870 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 TCEAL4Q96EI5 215 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 DIRAS2Q96HU8 199 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CLPTM1LQ96KA5 538 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 THUMPD3Q9BV44 507 aaKnown RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 ZFYVE1Q9HBF4 777 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 STK32BQ9NY57 414 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 PDE10AQ9Y233 779 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 KRT33AO76009 404 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 MYCLP12524 364 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 FGFR3P22607 806 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 ACADSBP45954 432 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 BTN3A2P78410 334 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 NDUFAF6Q330K2 333 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 COLEC12Q5KU26 742 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 NUDT16Q96DE0 195 aaKnown RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 TRMT112Q9UI30 125 aaKnown RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 RAB19A4D1S5 217 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CLCA1A8K7I4 914 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 H0YGN5 161 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 AIREO43918 545 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 MYL12AP19105 171 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 ARL4AP40617 200 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 GPR85P60893 370 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 TIMM10P62072 90 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CHSY1Q86X52 802 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 ZNF677Q86XU0 584 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 LRRC4BQ9NT99 713 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 NFS1Q9Y697 457 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 NEDD4P46934 1319 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 ZNF263O14978 683 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 ZNF14P17017 642 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 EVI2BP34910 448 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 MERTKQ12866 999 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 NSMFQ6X4W1 530 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 SLC22A9Q8IVM8 553 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 IFNL3Q8IZI9 196 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 DENND6BQ8NEG7 585 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 ZNF436Q9C0F3 470 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 LRRC19Q9H756 370 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CLN6Q9NWW5 311 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CMTM6Q9NX76 183 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 SGCEO43556 437 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 REM1O75628 298 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 MTA2O94776 668 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CYP3A5P20815 502 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 FSTL1Q12841 308 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 IL18R1Q13478 541 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 GIT2Q14161 759 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 TRABD2AQ86V40 505 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 DSELQ8IZU8 1212 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CAMKK1Q8N5S9 505 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 METTL25Q8N6Q8 603 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 GALNT11Q8NCW6 608 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 RNF145Q96MT1 663 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 COPS4Q9BT78 406 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CLPBQ9H078 707 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 KAT8Q9H7Z6 458 aaKnown RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 FBXO6Q9NRD1 293 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 GLTPQ9NZD2 209 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 AASSQ9UDR5 926 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 FETUBQ9UGM5 382 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 SNRPB2P08579 225 aaKnown RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 TCF3P15923 654 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CDKL1Q00532 357 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CYP2R1Q6VVX0 501 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 PLCZ1Q86YW0 608 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 IFNLR1Q8IU57 520 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 LRRC71Q8N4P6 559 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 OR10T2Q8NGX3 314 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 TM9SF2Q99805 663 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 HOPXQ9BPY8 73 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 MTMR10Q9NXD2 777 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 CD274Q9NZQ7 290 aa4.99□□□□□ -1.61
VPS13D-213ENST00000613099 H2AFY2Q9P0M6 372 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-213ENST00000613099 PI4KBQ9UBF8 816 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms