RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PTTG3PQ9NZH4 202 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 EDARQ9UNE0 448 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 SNX8Q9Y5X2 465 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 GJA3Q9Y6H8 435 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 COL6A2P12110 1019 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 BST1Q10588 318 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 EZH2Q15910 746 aaKnown RBP8.84□□□□□ -0.99
TTC28-208ENST00000612946 KCTD8Q6ZWB6 473 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 ZNF571Q7Z3V5 609 aaPredicted RBP8.84□□□□□ -0.99
TTC28-208ENST00000612946 ZBTB33Q86T24 672 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 RASGEF1CQ8N431 466 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 C12orf50Q8NA57 414 aaPredicted RBP8.84□□□□□ -0.99
TTC28-208ENST00000612946 C12orf43Q96C57 262 aaKnown RBP8.84□□□□□ -0.99
TTC28-208ENST00000612946 DUSP10Q9Y6W6 482 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 COQ9O75208 318 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 OR6B1O95007 311 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 SNX4O95219 450 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 MAPK9P45984 424 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 COA7Q96BR5 231 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 AGPAT3Q9NRZ7 376 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 PPP2R3BQ9Y5P8 575 aa8.84□□□□□ -0.99
TTC28-208ENST00000612946 ERBB2P04626 1255 aa8.84□□□□□ -1
TTC28-208ENST00000612946 PRKCBP05771 671 aa8.84□□□□□ -1
TTC28-208ENST00000612946 EIF4BP23588 611 aaKnown RBP8.84□□□□□ -1
TTC28-208ENST00000612946 PCSK1P29120 753 aa8.84□□□□□ -1
TTC28-208ENST00000612946 PCID2Q5JVF3 399 aa8.84□□□□□ -1
TTC28-208ENST00000612946 IGDCC4Q8TDY8 1250 aa8.84□□□□□ -1
TTC28-208ENST00000612946 DDX17Q92841 729 aaKnown RBP8.84□□□□□ -1
TTC28-208ENST00000612946 ACTR6Q9GZN1 396 aa8.84□□□□□ -1
TTC28-208ENST00000612946 RDH8Q9NYR8 311 aa8.84□□□□□ -1
TTC28-208ENST00000612946 PCDHA10Q9Y5I2 948 aa8.84□□□□□ -1
TTC28-208ENST00000612946 NPM3O75607 178 aaKnown RBP8.83□□□□□ -1
TTC28-208ENST00000612946 GLP2RO95838 553 aa8.83□□□□□ -1
TTC28-208ENST00000612946 PRKACAP17612 351 aa8.83□□□□□ -1
TTC28-208ENST00000612946 IDH2P48735 452 aaKnown RBP8.83□□□□□ -1
TTC28-208ENST00000612946 GRHL2Q6ISB3 625 aa8.83□□□□□ -1
TTC28-208ENST00000612946 GPAT2Q6NUI2 795 aa8.83□□□□□ -1
TTC28-208ENST00000612946 PTF1AQ7RTS3 328 aa8.83□□□□□ -1
TTC28-208ENST00000612946 CFAP206Q8IYR0 622 aa8.83□□□□□ -1
TTC28-208ENST00000612946 IPMKQ8NFU5 416 aa8.83□□□□□ -1
TTC28-208ENST00000612946 ERLEC1Q96DZ1 483 aa8.83□□□□□ -1
TTC28-208ENST00000612946 AP1S3Q96PC3 154 aa8.83□□□□□ -1
TTC28-208ENST00000612946 DOLKQ9UPQ8 538 aa8.83□□□□□ -1
TTC28-208ENST00000612946 PLLPQ9Y342 182 aa8.83□□□□□ -1
TTC28-208ENST00000612946 RBMX2Q9Y388 322 aaKnown RBP8.83□□□□□ -1
TTC28-208ENST00000612946 PCDHGA11Q9Y5H2 935 aa8.83□□□□□ -1
TTC28-208ENST00000612946 ABCC3O15438 1527 aa8.83□□□□□ -1
TTC28-208ENST00000612946 NFAT5O94916 1531 aa8.83□□□□□ -1
TTC28-208ENST00000612946 H0YIN7 160 aa8.83□□□□□ -1
TTC28-208ENST00000612946 AVILO75366 819 aa8.83□□□□□ -1
TTC28-208ENST00000612946 IL7P13232 177 aa8.83□□□□□ -1
TTC28-208ENST00000612946 HTR2AP28223 471 aa8.83□□□□□ -1
TTC28-208ENST00000612946 KCTD1Q719H9 257 aa8.83□□□□□ -1
TTC28-208ENST00000612946 R3HCC1LQ7Z5L2 792 aaKnown RBP8.83□□□□□ -1
TTC28-208ENST00000612946 ASB15Q8WXK1 588 aa8.83□□□□□ -1
TTC28-208ENST00000612946 NELL1Q92832 810 aa8.83□□□□□ -1
TTC28-208ENST00000612946 MID1IP1Q9NPA3 183 aa8.83□□□□□ -1
TTC28-208ENST00000612946 FADS2P1A8MWK0 482 aa8.83□□□□□ -1
TTC28-208ENST00000612946 EFCAB9A8MZ26 197 aa8.83□□□□□ -1
TTC28-208ENST00000612946 S100A3P33764 101 aa8.83□□□□□ -1
TTC28-208ENST00000612946 HALP42357 657 aa8.83□□□□□ -1
TTC28-208ENST00000612946 KLK7P49862 253 aa8.83□□□□□ -1
TTC28-208ENST00000612946 SLC25A3Q00325 362 aa8.83□□□□□ -1
TTC28-208ENST00000612946 CLCA4Q14CN2 919 aa8.83□□□□□ -1
TTC28-208ENST00000612946 MTERF2Q49AM1 385 aa8.83□□□□□ -1
TTC28-208ENST00000612946 VPS26BQ4G0F5 336 aa8.83□□□□□ -1
TTC28-208ENST00000612946 CHMP1BQ7LBR1 199 aa8.83□□□□□ -1
TTC28-208ENST00000612946 ZNF408Q9H9D4 720 aa8.83□□□□□ -1
TTC28-208ENST00000612946 UNKLQ9H9P5 680 aaKnown RBP8.83□□□□□ -1
TTC28-208ENST00000612946 FNDC3AQ9Y2H6 1198 aaKnown RBP8.83□□□□□ -1
TTC28-208ENST00000612946 TSTD3H0UI37 97 aa8.83□□□□□ -1
TTC28-208ENST00000612946 RPS6KA4O75676 772 aa8.83□□□□□ -1
TTC28-208ENST00000612946 RB1P06400 928 aa8.83□□□□□ -1
TTC28-208ENST00000612946 GRIA1P42261 906 aa8.83□□□□□ -1
TTC28-208ENST00000612946 USP17L2Q6R6M4 530 aa8.83□□□□□ -1
TTC28-208ENST00000612946 LRRC71Q8N4P6 559 aa8.83□□□□□ -1
TTC28-208ENST00000612946 ADAM32Q8TC27 787 aa8.83□□□□□ -1
TTC28-208ENST00000612946 FARSBQ9NSD9 589 aaKnown RBP8.83□□□□□ -1
TTC28-208ENST00000612946 SAMHD1Q9Y3Z3 626 aaKnown RBP8.83□□□□□ -1
TTC28-208ENST00000612946 TBX22Q9Y458 520 aa8.83□□□□□ -1
TTC28-208ENST00000612946 GNG14A0A1W2PPG7 69 aa8.83□□□□□ -1
TTC28-208ENST00000612946 M0R233 179 aa8.83□□□□□ -1
TTC28-208ENST00000612946 PDCD5O14737 125 aa8.83□□□□□ -1
TTC28-208ENST00000612946 GSTT2P0CG29 244 aa8.83□□□□□ -1
TTC28-208ENST00000612946 PEX2P28328 305 aa8.83□□□□□ -1
TTC28-208ENST00000612946 SPATA19Q7Z5L4 167 aa8.83□□□□□ -1
TTC28-208ENST00000612946 TRUB1Q8WWH5 349 aaKnown RBP8.83□□□□□ -1
TTC28-208ENST00000612946 KCTD10Q9H3F6 313 aa8.83□□□□□ -1
TTC28-208ENST00000612946 ARMC1Q9NVT9 282 aa8.83□□□□□ -1
TTC28-208ENST00000612946 ALG5Q9Y673 324 aa8.83□□□□□ -1
TTC28-208ENST00000612946 KIF13AQ9H1H9 1805 aa8.83□□□□□ -1
TTC28-208ENST00000612946 PPEF2O14830 753 aa8.83□□□□□ -1
TTC28-208ENST00000612946 FOSL2P15408 326 aa8.83□□□□□ -1
TTC28-208ENST00000612946 CYP11B2P19099 503 aa8.83□□□□□ -1
TTC28-208ENST00000612946 PKNOX1P55347 436 aa8.83□□□□□ -1
TTC28-208ENST00000612946 WDR45BQ5MNZ6 344 aa8.83□□□□□ -1
TTC28-208ENST00000612946 FAM180AQ6UWF9 173 aa8.83□□□□□ -1
TTC28-208ENST00000612946 MED30Q96HR3 178 aa8.83□□□□□ -1
TTC28-208ENST00000612946 RIT2Q99578 217 aa8.83□□□□□ -1
TTC28-208ENST00000612946 CCDC167Q9P0B6 97 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms