RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 LGSNQ5TDP6 509 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 ARMC3Q5W041 872 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 ZNF449Q6P9G9 518 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 KDELC1Q6UW63 502 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 RANBP10Q6VN20 620 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 LEKR1Q6ZMV7 388 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 GRASPQ7Z6J2 395 aaPredicted RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 TMEM135Q86UB9 458 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 TRABD2AQ86V40 505 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 SLC26A11Q86WA9 606 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 BBS7Q8IWZ6 715 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CTAGE3PQ8IX95 158 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CARNMT1Q8N4J0 409 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 PPM1NQ8N819 430 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 TDRD5Q8NAT2 981 aaKnown RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 TTC16Q8NEE8 873 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 SH3RF2Q8TEC5 729 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 DDI1Q8WTU0 396 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 DCAKDQ8WVC6 231 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 PSKH2Q96QS6 385 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 APOL2Q9BQE5 337 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 TRIM56Q9BRZ2 755 aaKnown RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 FICDQ9BVA6 458 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 PBX4Q9BYU1 374 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 MUC3BQ9H195 1237 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 TLE6Q9H808 572 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CERS4Q9HA82 394 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 ARNT2Q9HBZ2 717 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 TDP1Q9NUW8 608 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 UBA2Q9UBT2 640 aaPredicted RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 SEPT3Q9UH03 358 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 ZNF180Q9UJW8 692 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 RPS6KL1Q9Y6S9 549 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CHD7Q9P2D1 2997 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 LOC100996750A0A140TA64 210 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 IQANK1A0A1B0GTG1 560 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CCDC85CA6NKD9 419 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CXorf49A8MYA2 514 aaPredicted RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CBX4O00257 560 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 ATP9BO43861 1147 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 PIAS1O75925 651 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 USP1O94782 785 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 MMP2P08253 660 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 BRAFP15056 766 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 TPH1P17752 444 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CES1P23141 567 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CD86P42081 329 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 WNT3AP56704 352 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 DSC2Q02487 901 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 NAB1Q13506 487 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CDH18Q13634 790 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 FRG1Q14331 258 aaKnown RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CRYMQ14894 314 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 DUSP6Q16828 381 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 FSCBQ5H9T9 825 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 PCID2Q5JVF3 399 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 PPP2R2DQ66LE6 453 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 ALG1LQ6GMV1 187 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 DENND5AQ6IQ26 1287 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 TRMT10BQ6PF06 316 aaKnown RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 ADGRD2Q7Z7M1 963 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 SRRM1Q8IYB3 904 aaKnown RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CNPY4Q8N129 248 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 PGBD5Q8N414 524 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 ARMC2Q8NEN0 867 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 ARRDC2Q8TBH0 407 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CDKL2Q92772 493 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 USP13Q92995 863 aaPredicted RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 TADA1Q96BN2 335 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 ZNF707Q96C28 371 aaPredicted RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 SEMA3CQ99985 751 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 SELENOSQ9BQE4 189 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 FEM1AQ9BSK4 669 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 KIFC1Q9BW19 673 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CINPQ9BW66 212 aaPredicted RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 KRTAP4-6Q9BYQ5 205 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 SMG9Q9H0W8 520 aaKnown RBP9.03□□□□□ -0.96
CCDC47-207ENST00000612558 NKX2-4Q9H2Z4 354 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 PIDD1Q9HB75 910 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 SOX13Q9UN79 622 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 CCL26Q9Y258 94 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 FAM169AQ9Y6X4 670 aa9.03□□□□□ -0.96
CCDC47-207ENST00000612558 HELZP42694 1942 aaKnown RBP9.02□□□□□ -0.96
CCDC47-207ENST00000612558 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.02□□□□□ -0.97
CCDC47-207ENST00000612558 MUSKO15146 869 aa9.02□□□□□ -0.97
CCDC47-207ENST00000612558 ZMPSTE24O75844 475 aa9.02□□□□□ -0.97
CCDC47-207ENST00000612558 PAPLNO95428 1278 aa9.02□□□□□ -0.97
CCDC47-207ENST00000612558 EPOP01588 193 aa9.02□□□□□ -0.97
CCDC47-207ENST00000612558 CYBBP04839 570 aa9.02□□□□□ -0.97
CCDC47-207ENST00000612558 TCF3P15923 654 aa9.02□□□□□ -0.97
CCDC47-207ENST00000612558 GLDCP23378 1020 aa9.02□□□□□ -0.97
CCDC47-207ENST00000612558 MZF1P28698 734 aaPredicted RBP9.02□□□□□ -0.97
CCDC47-207ENST00000612558 NRIP1P48552 1158 aa9.02□□□□□ -0.97
CCDC47-207ENST00000612558 GNGT1P63211 74 aa9.02□□□□□ -0.97
CCDC47-207ENST00000612558 NTHL1P78549 312 aa9.02□□□□□ -0.97
CCDC47-207ENST00000612558 GUCY1A3Q02108 690 aa9.02□□□□□ -0.97
CCDC47-207ENST00000612558 MGAT5Q09328 741 aa9.02□□□□□ -0.97
CCDC47-207ENST00000612558 PCSK7Q16549 785 aa9.02□□□□□ -0.97
CCDC47-207ENST00000612558 ANKRD20A4Q4UJ75 823 aa9.02□□□□□ -0.97
CCDC47-207ENST00000612558 INO80DQ53TQ3 878 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms