RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 NEU3Q9UQ49 428 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 PCDHB5Q9Y5E4 795 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 OR6C75A6NL08 312 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 MATN2O00339 956 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 DCXO43602 365 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 JCHAINP01591 159 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 COL6A2P12110 1019 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 COX4I1P13073 169 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 CPB1P15086 417 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 FGFR3P22607 806 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 RFC2P35250 354 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 POLD2P49005 469 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 SLC5A3P53794 718 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 CDC16Q13042 620 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 KLF10Q13118 480 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 CCNIQ14094 377 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 HNRNPDQ14103 355 aaKnown RBP14.88□□□□□ -0.03
CDH1-213ENST00000612417 SDHAF4Q5VUM1 108 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 LIPMQ5VYY2 423 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 TMEM173Q86WV6 379 aaPredicted RBP14.88□□□□□ -0.03
CDH1-213ENST00000612417 CNTD1Q8N815 330 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 ACVR1CQ8NER5 493 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 SHKBP1Q8TBC3 707 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 MAPK15Q8TD08 544 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 ACE2Q9BYF1 805 aaPredicted RBP14.88□□□□□ -0.03
CDH1-213ENST00000612417 ILKAPQ9H0C8 392 aaPredicted RBP14.88□□□□□ -0.03
CDH1-213ENST00000612417 TCF7L2Q9NQB0 619 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 ZDHHC7Q9NXF8 308 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 ARHGAP26Q9UNA1 814 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 AAR2Q9Y312 384 aaKnown RBP14.88□□□□□ -0.03
CDH1-213ENST00000612417 RAP2CQ9Y3L5 183 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 ASB3Q9Y575 518 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.87□□□□□ -0.03
CDH1-213ENST00000612417 SLC22A2O15244 555 aa14.87□□□□□ -0.03
CDH1-213ENST00000612417 IGLV3-25P01717 112 aa14.87□□□□□ -0.03
CDH1-213ENST00000612417 CCNCP24863 283 aa14.87□□□□□ -0.03
CDH1-213ENST00000612417 EIF4EBP2Q13542 120 aaPredicted RBP14.87□□□□□ -0.03
CDH1-213ENST00000612417 MRPL58Q14197 206 aaKnown RBP14.87□□□□□ -0.03
CDH1-213ENST00000612417 GRM3Q14832 879 aa14.87□□□□□ -0.03
CDH1-213ENST00000612417 DDR2Q16832 855 aa14.87□□□□□ -0.03
CDH1-213ENST00000612417 TAC4Q86UU9 113 aa14.87□□□□□ -0.03
CDH1-213ENST00000612417 DEFB107AQ8IZN7 70 aa14.87□□□□□ -0.03
CDH1-213ENST00000612417 APOL2Q9BQE5 337 aa14.87□□□□□ -0.03
CDH1-213ENST00000612417 TRIM62Q9BVG3 475 aa14.87□□□□□ -0.03
CDH1-213ENST00000612417 TMEM106CQ9BVX2 250 aa14.87□□□□□ -0.03
CDH1-213ENST00000612417 SLC39A10Q9ULF5 831 aa14.87□□□□□ -0.03
CDH1-213ENST00000612417 POMPQ9Y244 141 aa14.87□□□□□ -0.03
CDH1-213ENST00000612417 SNX10Q9Y5X0 201 aa14.87□□□□□ -0.03
CDH1-213ENST00000612417 H7C4K7 107 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 HDAC3O15379 428 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 SBK3P0C264 359 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 SRGAP2BP0DMP2 458 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 RAG1P15918 1043 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 HTR7P34969 479 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 ABCG1P45844 678 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 MTTPP55157 894 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 UGP2Q16851 508 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 RTP2Q5QGT7 225 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 TAS1R1Q7RTX1 841 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 NECAB2Q7Z6G3 386 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 FBXW8Q8N3Y1 598 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 ATAD1Q8NBU5 361 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 RNF34Q969K3 372 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 FUBP3Q96I24 572 aaKnown RBP eCLIP14.86□□□□□ -0.03
CDH1-213ENST00000612417 TTPALQ9BTX7 342 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 TLK1Q9UKI8 766 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 MYO16Q9Y6X6 1858 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 NYNRINQ9P2P1 1898 aaKnown RBP14.86□□□□□ -0.03
CDH1-213ENST00000612417 TARM1B6A8C7 271 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 E9PBE3 544 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 KLHL41O60662 606 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 BAG2O95816 211 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 TIMP1P01033 207 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 F7P08709 466 aaPredicted RBP14.86□□□□□ -0.03
CDH1-213ENST00000612417 SLC35E2BP0CK96 405 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 CSF2RAP15509 400 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 TPH1P17752 444 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 HOXC13P31276 330 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 GPR15P49685 360 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 EPHB1P54762 984 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 XIAPP98170 497 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 TBL3Q12788 808 aaKnown RBP14.86□□□□□ -0.03
CDH1-213ENST00000612417 CUL3Q13618 768 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 SLC12A1Q13621 1099 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 PCID2Q5JVF3 399 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 BTBD8Q5XKL5 378 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 PKN3Q6P5Z2 889 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 TMCO2Q7Z6W1 182 aaPredicted RBP14.86□□□□□ -0.03
CDH1-213ENST00000612417 STYXQ8WUJ0 223 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 BCL7CQ8WUZ0 217 aaPredicted RBP14.86□□□□□ -0.03
CDH1-213ENST00000612417 PTCD2Q8WV60 388 aaKnown RBP14.86□□□□□ -0.03
CDH1-213ENST00000612417 PPP1R2P1Q96PQ5 205 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 FCRL5Q96RD9 977 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 VCX3BQ9H321 246 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 TASP1Q9H6P5 420 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 MAN1C1Q9NR34 630 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 ARHGEF38Q9NXL2 777 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 SLC27A5Q9Y2P5 690 aa14.86□□□□□ -0.03
CDH1-213ENST00000612417 TRIM43BA6NCK2 446 aa14.85□□□□□ -0.03
CDH1-213ENST00000612417 SLCO1B7G3V0H7 640 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms