RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 EGFL7Q9UHF1 273 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 TCAF2A6NFQ2 919 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 SAC3D1A6NKF1 404 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 PTGESO14684 152 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 TIPRLO75663 272 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 MT-ND1P03886 318 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 ATP5BP06576 529 aaKnown RBP14.21□□□□□ -0.14
COL6A1-207ENST00000612273 CCDC166P0CW27 439 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 SMIM18P0DKX4 95 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 BRCC3P46736 316 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 RAB10P61026 200 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 PSME3P61289 254 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 APLFQ8IW19 511 aaPredicted RBP14.21□□□□□ -0.14
COL6A1-207ENST00000612273 ARHGAP18Q8N392 663 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 TRIML2Q8N7C3 387 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 OR52K2Q8NGK3 314 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 ZFP28Q8NHY6 868 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 TMEM209Q96SK2 561 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 GPR22Q99680 433 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 RHBDL2Q9NX52 303 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 CPA4Q9UI42 421 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 PPP2R3BQ9Y5P8 575 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 NRCAMQ92823 1304 aa14.21□□□□□ -0.14
COL6A1-207ENST00000612273 ZNF839A8K0R7 811 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 F8W810 466 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 CABYRO75952 493 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 PCSK6P29122 969 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 CASP2P42575 452 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 SCNN1GP51170 649 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 MAP7Q14244 749 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 FAM83EQ2M2I3 478 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 TSTD2Q5T7W7 516 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 KLHDC10Q6PID8 442 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 PIM3Q86V86 326 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 LPGAT1Q92604 370 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 C1QTNF1Q9BXJ1 281 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 ALG9Q9H6U8 611 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 RGS17Q9UGC6 210 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-207ENST00000612273 ADAM28Q9UKQ2 775 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 SIP14410 1827 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 LRRC14BA6NHZ5 514 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 TMEM114B3SHH9 223 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 B3GAT3O94766 335 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 PABPC4LP0CB38 370 aaKnown RBP14.2□□□□□ -0.14
COL6A1-207ENST00000612273 KIF19Q2TAC6 998 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 LRRC23Q53EV4 343 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-207ENST00000612273 HABP4Q5JVS0 413 aaKnown RBP14.2□□□□□ -0.14
COL6A1-207ENST00000612273 KCTD11Q693B1 232 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 FASTKD5Q7L8L6 764 aaKnown RBP14.2□□□□□ -0.14
COL6A1-207ENST00000612273 ARHGAP22Q7Z5H3 698 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 KDM1BQ8NB78 822 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 ZFAND2BQ8WV99 257 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 EZH1Q92800 747 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-207ENST00000612273 ABTB1Q969K4 478 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-207ENST00000612273 TBL1YQ9BQ87 522 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 Q9H521 79 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 ZBTB26Q9HCK0 441 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 MIOSQ9NXC5 875 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 RCOR3Q9P2K3 495 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-207ENST00000612273 FBXO5Q9UKT4 447 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 CLEC11AQ9Y240 323 aa14.2□□□□□ -0.14
COL6A1-207ENST00000612273 LTBP3Q9NS15 1303 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 TOMM70O94826 608 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 INHBCP55103 352 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 NAB1Q13506 487 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 FASTKQ14296 549 aaKnown RBP14.19□□□□□ -0.14
COL6A1-207ENST00000612273 ZNF792Q3KQV3 632 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 KRT80Q6KB66 452 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 ALKAL1Q6UXT8 129 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 SMG8Q8ND04 991 aaKnown RBP14.19□□□□□ -0.14
COL6A1-207ENST00000612273 STYXQ8WUJ0 223 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 LRCH3Q96II8 777 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 OSBPL2Q9H1P3 480 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 ZDHHC7Q9NXF8 308 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 ARHGEF38Q9NXL2 777 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 ZNF487B1APH4 448 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 AKAP10O43572 662 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 XPOTO43592 962 aaKnown RBP14.19□□□□□ -0.14
COL6A1-207ENST00000612273 FOXD2O60548 495 aaPredicted RBP14.19□□□□□ -0.14
COL6A1-207ENST00000612273 CLIC3O95833 236 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 OR4Q2P0C623 313 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 CHRM3P20309 590 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 CES1P23141 567 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 NPY2RP49146 381 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 MAP7D1Q3KQU3 841 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 METTL21CQ5VZV1 264 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 SCN4BQ8IWT1 228 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 SLC29A1Q99808 456 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 ADARB2Q9NS39 739 aaKnown RBP14.19□□□□□ -0.14
COL6A1-207ENST00000612273 NCKIPSDQ9NZQ3 722 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 RIMS3Q9UJD0 308 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 KCTD3Q9Y597 815 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 PAPPA2Q9BXP8 1791 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 C7orf72A4D263 438 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 PDLIM1O00151 329 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 SDHDO14521 159 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 GJB3O75712 270 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 RPL5P46777 297 aaKnown RBP14.19□□□□□ -0.14
COL6A1-207ENST00000612273 USP46P62068 366 aa14.19□□□□□ -0.14
COL6A1-207ENST00000612273 DUSP28Q4G0W2 176 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms