RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 VCPIP1Q96JH7 1222 aa17■□□□□ 0.31
TVP23A-210ENST00000612195 IL12RB2Q99665 862 aa17■□□□□ 0.31
TVP23A-210ENST00000612195 TCEAL2Q9H3H9 227 aaPredicted RBP17■□□□□ 0.31
TVP23A-210ENST00000612195 METTL5Q9NRN9 209 aaKnown RBP17■□□□□ 0.31
TVP23A-210ENST00000612195 NCKIPSDQ9NZQ3 722 aa17■□□□□ 0.31
TVP23A-210ENST00000612195 SATB2Q9UPW6 733 aa17■□□□□ 0.31
TVP23A-210ENST00000612195 KIF26BQ2KJY2 2108 aa17■□□□□ 0.31
TVP23A-210ENST00000612195 CXorf51AA0A1B0GTR3 108 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 EME2A4GXA9 379 aaPredicted RBP16.99■□□□□ 0.31
TVP23A-210ENST00000612195 FAM72CH0Y354 149 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 ERVH48-1M5A8F1 160 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 TPP1O14773 563 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 GCATO75600 419 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 UCHL3P15374 230 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 RHOQP17081 205 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 ETFBP38117 255 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 MAPKAPK2P49137 400 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 UCNP55089 124 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 NRG1Q02297 640 aaPredicted RBP16.99■□□□□ 0.31
TVP23A-210ENST00000612195 C1orf61Q13536 156 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 POLD3Q15054 466 aaPredicted RBP16.99■□□□□ 0.31
TVP23A-210ENST00000612195 NR0B2Q15466 257 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 MYLK3Q32MK0 819 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 TAF1BQ53T94 588 aaPredicted RBP16.99■□□□□ 0.31
TVP23A-210ENST00000612195 FAM72AQ5TYM5 149 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 FAM72DQ6L9T8 149 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 CRTC1Q6UUV9 634 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 FAM72BQ86X60 149 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 RBFAQ8N0V3 343 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 DENND6BQ8NEG7 585 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 OR2AP1Q8NGE2 309 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 EPS8L1Q8TE68 723 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 RXFP2Q8WXD0 754 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 CENPTQ96BT3 561 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 KLHL32Q96NJ5 620 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 STK33Q9BYT3 514 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 THSD1Q9NS62 852 aa16.99■□□□□ 0.31
TVP23A-210ENST00000612195 PNMA8BQ9ULN7 279 aaPredicted RBP16.99■□□□□ 0.31
TVP23A-210ENST00000612195 F8VZ95 297 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 AREL1O15033 823 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 MUSKO15146 869 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 CASC3O15234 703 aaKnown RBP16.98■□□□□ 0.31
TVP23A-210ENST00000612195 POP4O95707 220 aaKnown RBP16.98■□□□□ 0.31
TVP23A-210ENST00000612195 GSRP00390 522 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 RBMS1P29558 406 aaKnown RBP16.98■□□□□ 0.31
TVP23A-210ENST00000612195 THOP1P52888 689 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 ADKP55263 362 aaKnown RBP16.98■□□□□ 0.31
TVP23A-210ENST00000612195 GEMIN4P57678 1058 aaKnown RBP16.98■□□□□ 0.31
TVP23A-210ENST00000612195 SNRPD1P62314 119 aaKnown RBP16.98■□□□□ 0.31
TVP23A-210ENST00000612195 PTK2BQ14289 1009 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 DPCR1Q3MIW9 517 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 ARL13BQ3SXY8 428 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 CCDC14Q49A88 953 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 PRRT3Q5FWE3 981 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 LRRC73Q5JTD7 316 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 PERM1Q5SV97 790 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 ATXN7L2Q5T6C5 722 aaPredicted RBP16.98■□□□□ 0.31
TVP23A-210ENST00000612195 TTC7BQ86TV6 843 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 VPS36Q86VN1 386 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 TPCN2Q8NHX9 752 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 GPT2Q8TD30 523 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 SLC20A1Q8WUM9 679 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 BTN2A2Q8WVV5 523 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 SLC46A1Q96NT5 459 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 BOCQ9BWV1 1114 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 OSBPL1AQ9BXW6 950 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 DPH1Q9BZG8 443 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 MAGEH1Q9H213 219 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 RETREG1Q9H6L5 497 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 TMEM248Q9NWD8 314 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 SPASTQ9UBP0 616 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 APOBEC3BQ9UH17 382 aaKnown RBP16.98■□□□□ 0.31
TVP23A-210ENST00000612195 HPCAL4Q9UM19 191 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 ENTPD2Q9Y5L3 495 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 COL6A6A6NMZ7 2263 aa16.98■□□□□ 0.31
TVP23A-210ENST00000612195 RIOK3O14730 519 aaKnown RBP16.97■□□□□ 0.31
TVP23A-210ENST00000612195 MMP20O60882 483 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 RAMP2O60895 175 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 LRIG2O94898 1065 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 GJB6O95452 261 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 PLEKP08567 350 aaPredicted RBP16.97■□□□□ 0.31
TVP23A-210ENST00000612195 ITIH2P19823 946 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 MMP8P22894 467 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 SDC4P31431 198 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 IGFALSP35858 605 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 RHDQ02161 417 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 IGF2-ASQ6U949 168 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 GDPD4Q6W3E5 623 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 RBM44Q6ZP01 1051 aaKnown RBP16.97■□□□□ 0.31
TVP23A-210ENST00000612195 SLC35F3Q8IY50 421 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 JOSD2Q8TAC2 188 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 GRAMD1AQ96CP6 724 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 ARHGEF26Q96DR7 871 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 PRR11Q96HE9 360 aaPredicted RBP16.97■□□□□ 0.31
TVP23A-210ENST00000612195 LRRC61Q9BV99 259 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 NOCTQ9UK39 431 aaKnown RBP16.97■□□□□ 0.31
TVP23A-210ENST00000612195 NEU3Q9UQ49 428 aa16.97■□□□□ 0.31
TVP23A-210ENST00000612195 BOD1L1Q8NFC6 3051 aa16.96■□□□□ 0.31
TVP23A-210ENST00000612195 PMS2P1A4D2B8 440 aa16.96■□□□□ 0.31
TVP23A-210ENST00000612195 C2CD4BA6NLJ0 364 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms