RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 TRIM15Q9C019 465 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 KLHL4Q9C0H6 718 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 BAG5Q9UL15 447 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 TCAF1Q9Y4C2 921 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 NHSQ6T4R5 1651 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 NEMP2A6NFY4 417 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 HLA-DPA1P20036 260 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 MPP1Q00013 466 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 RALGPS1Q5JS13 557 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 FAM91A1Q658Y4 838 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 ZC3HC1Q86WB0 502 aaKnown RBP6.44□□□□□ -1.38
SNX13-213ENST00000611725 LGI2Q8N0V4 545 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 NUP93Q8N1F7 819 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 ANKLE1Q8NAG6 615 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 RSPH1Q8WYR4 309 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 NXNL1Q96CM4 212 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 FUBP3Q96I24 572 aaKnown RBP eCLIP6.44□□□□□ -1.38
SNX13-213ENST00000611725 PPP1R10Q96QC0 940 aaKnown RBP6.44□□□□□ -1.38
SNX13-213ENST00000611725 MLPHQ9BV36 600 aaPredicted RBP6.44□□□□□ -1.38
SNX13-213ENST00000611725 MUC3BQ9H195 1237 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 RRAGCQ9HB90 399 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 GTF2IRD1Q9UHL9 959 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 ARHGAP10A1A4S6 786 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 XPAP23025 273 aaPredicted RBP6.44□□□□□ -1.38
SNX13-213ENST00000611725 PSME3P61289 254 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 INPP5AQ14642 412 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 ZRANB3Q5FWF4 1079 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 SLC41A1Q8IVJ1 513 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 BTN2A3PQ96KV6 586 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 POMKQ9H5K3 350 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 SMPD4Q9NXE4 827 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 TRMT6Q9UJA5 497 aaKnown RBP6.44□□□□□ -1.38
SNX13-213ENST00000611725 VPS28Q9UK41 221 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 F7P08709 466 aaPredicted RBP6.44□□□□□ -1.38
SNX13-213ENST00000611725 RECQLP46063 649 aaPredicted RBP6.44□□□□□ -1.38
SNX13-213ENST00000611725 KCNK10P57789 538 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 RHOAP61586 193 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 SERINC5Q86VE9 423 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.44□□□□□ -1.38
SNX13-213ENST00000611725 ZMIZ2Q8NF64 920 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 BHMTQ93088 406 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 GPR63Q9BZJ6 419 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.44□□□□□ -1.38
SNX13-213ENST00000611725 MID1IP1Q9NPA3 183 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 NDFIP2Q9NV92 336 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 KNL1Q8NG31 2342 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 OR6C75A6NL08 312 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 KCNU1A8MYU2 1149 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 FGF1P05230 155 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 CHRNGP07510 517 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 ADSLP30566 484 aaPredicted RBP6.44□□□□□ -1.38
SNX13-213ENST00000611725 RGS4P49798 205 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 LSM12Q3MHD2 195 aaKnown RBP6.44□□□□□ -1.38
SNX13-213ENST00000611725 FBXO39Q8N4B4 442 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 OR52K2Q8NGK3 314 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 MIPOL1Q8TD10 442 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 ZNF333Q96JL9 665 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 MS4A4AQ96JQ5 239 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 TBATAQ96M53 351 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 DDX50Q9BQ39 737 aaKnown RBP6.44□□□□□ -1.38
SNX13-213ENST00000611725 WDR6Q9NNW5 1121 aaKnown RBP6.44□□□□□ -1.38
SNX13-213ENST00000611725 OXSMQ9NWU1 459 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 DNAJC28Q9NX36 388 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 POMPQ9Y244 141 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 ZCWPW2A0A1B0GU75 182 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 DCLK1O15075 740 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 SLC7A4O43246 635 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 ITM2AO43736 263 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 GPR32O75388 356 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 IPO13O94829 963 aaKnown RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 RTN3O95197 1032 aaPredicted RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 CKMP06732 381 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 FGF3P11487 239 aaPredicted RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 ZNF33AQ06730 810 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 ITGA7Q13683 1181 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 FASTKQ14296 549 aaKnown RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 GSTA3Q16772 222 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 SAMD4BQ5PRF9 694 aaKnown RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 TMEM198Q66K66 360 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 ZFP1Q6P2D0 407 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 GPRIN1Q7Z2K8 1008 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 ENDOVQ8N8Q3 282 aaKnown RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 OR6Y1Q8NGX8 325 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 DLG3Q92796 817 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 SLC39A8Q9C0K1 460 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 GID8Q9NWU2 228 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 NDUFA13Q9P0J0 144 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 UBA2Q9UBT2 640 aaPredicted RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 STK39Q9UEW8 545 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 CROTQ9UKG9 612 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 GNEQ9Y223 722 aaKnown RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 FAM50BQ9Y247 325 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 A0A1W2PQH9 124 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 C9IYK1 514 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 ATP6V1B1P15313 513 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 AOC1P19801 751 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 ATP5C1P36542 298 aaKnown RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 TUFMP49411 452 aaKnown RBP6.43□□□□□ -1.38
SNX13-213ENST00000611725 GJA9P57773 515 aa6.43□□□□□ -1.38
SNX13-213ENST00000611725 BFSP2Q13515 415 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms