RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 SEL1LQ9UBV2 794 aa4.54□□□□□ -1.68
SMCHD1-213ENST00000609587 ADGRF5Q8IZF2 1346 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 ZNF521Q96K83 1311 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 CYSRT1A8MQ03 144 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 F5H0A9 414 aaPredicted RBP4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 HSPB6O14558 160 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 ATG13O75143 517 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 ZC3H11AO75152 810 aaKnown RBP eCLIP4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 HSPA1AP0DMV8 641 aaKnown RBP4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 HSPA1BP0DMV9 641 aaKnown RBP4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 CAPN3P20807 821 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 CHMP24386 653 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 GPR12P47775 334 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 EIF3BP55884 814 aaKnown RBP4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 SRSF1Q07955 248 aaKnown RBP eCLIP4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 LAMB3Q13751 1172 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 VEPH1Q14D04 833 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 TBCEQ15813 527 aaPredicted RBP4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 HYIQ5T013 277 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 ASPHD1Q5U4P2 390 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 ZNF517Q6ZMY9 492 aaPredicted RBP4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 C4orf50Q6ZRC1 276 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 FAM83HQ6ZRV2 1179 aaPredicted RBP4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 TMTC3Q6ZXV5 915 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 TECPR1Q7Z6L1 1165 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 MRPL10Q7Z7H8 261 aaKnown RBP4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 GPSM1Q86YR5 675 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 CAMK1DQ8IU85 385 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 CNTROBQ8N137 903 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 KDM1BQ8NB78 822 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 ZMIZ2Q8NF64 920 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 MPLKIPQ8TAP9 179 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 ADAMTS15Q8TE58 950 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 DECR2Q9NUI1 292 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 ELOVL5Q9NYP7 299 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 TBC1D14Q9P2M4 693 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 CTNNAL1Q9UBT7 734 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 PCDHA12Q9UN75 941 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 HS3ST3B1Q9Y662 390 aa4.53□□□□□ -1.68
SMCHD1-213ENST00000609587 A0A1W2PQM1 296 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 NPIPB15A6NHN6 443 aaPredicted RBP4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 CBY3A6NI87 242 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 STMND1H3BQB6 276 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 LDLRAD4O15165 306 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 NDUFB8O95169 186 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 DDX58O95786 925 aaKnown RBP4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 IFNA2P01563 188 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 MMP3P08254 477 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 PRF1P14222 555 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 PTPN2P17706 415 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 CTPS1P17812 591 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 ALDH7A1P49419 539 aaKnown RBP4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 CENPAP49450 140 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 PLCD1P51178 756 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 DCTN2Q13561 401 aaKnown RBP4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 RUNX2Q13950 521 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 TWIST1Q15672 202 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 ATG9BQ674R7 924 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 NCAPH2Q6IBW4 605 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 HEPHL1Q6MZM0 1159 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 LURAP1LQ8IV03 231 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 CADM3Q8N126 398 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 ARFGAP1Q8N6T3 406 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 ETNPPLQ8TBG4 499 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 RNF183Q96D59 192 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 RANBP17Q9H2T7 1088 aaKnown RBP4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 MAP6D1Q9H9H5 199 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 FZD3Q9NPG1 666 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 KRT84Q9NSB2 600 aa4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 SPATS2LQ9NUQ6 558 aaKnown RBP4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 BCCIPQ9P287 314 aaKnown RBP eCLIP4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 TDRD9Q8NDG6 1382 aaKnown RBP4.52□□□□□ -1.69
SMCHD1-213ENST00000609587 TMEM272A0A1B0GTI8 110 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 TYW5A2RUC4 315 aaKnown RBP4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 GAGE12JA6NER3 117 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 PGPEP1LA6NFU8 196 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 HMGB1P1B2RPK0 211 aaPredicted RBP4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 EBAG9O00559 213 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 MDM4O15151 490 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 USO1O60763 962 aaKnown RBP4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 KLKB1P03952 638 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 CLEC3BP05452 202 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 HEXAP06865 529 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 SPARCP09486 303 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 MYZAPP0CAP1 466 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 IRF1P10914 325 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 ENO3P13929 434 aaPredicted RBP4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 ZNF8P17098 575 aaPredicted RBP4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 CPOXP36551 454 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 AVPR1AP37288 418 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 RGS2P41220 211 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 NR4A2P43354 598 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 ME1P48163 572 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 POLD2P49005 469 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 EFNA5P52803 228 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 FOXG1P55316 489 aaPredicted RBP4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 DCAF7P61962 342 aa4.51□□□□□ -1.69
SMCHD1-213ENST00000609587 RABEP1Q15276 862 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms