RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 C16orf89Q6UX73 402 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 RASAL3Q86YV0 1011 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 TXNDC5Q8NBS9 432 aaKnown RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 PPHLN1Q8NEY8 458 aaKnown RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 HEXDCQ8WVB3 486 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 CASP10Q92851 521 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 TRAPPC9Q96Q05 1148 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 GCNAQ96QF7 691 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 NDNQ99608 321 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 ACBD6Q9BR61 282 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 FSD1LQ9BXM9 530 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 VCX3BQ9H321 246 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 DMAP1Q9NPF5 467 aaPredicted RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 FIS1Q9Y3D6 152 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 TCAF1Q9Y4C2 921 aa13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 FNDC1Q4ZHG4 1894 aaPredicted RBP13.13□□□□□ -0.31
SRGAP2-209ENST00000604247 F8W810 466 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 TXNDC9O14530 226 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 MOCS2O96007 188 aaPredicted RBP13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 ALDH1A3P47895 512 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 PRKAA2P54646 552 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 MRPS22P82650 360 aaKnown RBP13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 SEPT6Q14141 434 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 PIGGQ5H8A4 983 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 RBM20Q5T481 1227 aaKnown RBP13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 FAM219BQ5XKK7 198 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 FBXL19Q6PCT2 694 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 BNC2Q6ZN30 1099 aaPredicted RBP13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 RPS27LQ71UM5 84 aaKnown RBP13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 RNF135Q8IUD6 432 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 MRGPRX2Q96LB1 330 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 NPAS2Q99743 824 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 ZBTB26Q9HCK0 441 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 VTI1BQ9UEU0 232 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 PRPF19Q9UMS4 504 aaKnown RBP13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 TRPV2Q9Y5S1 764 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 COPG1Q9Y678 874 aaKnown RBP13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 ODC1P11926 461 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 RPL9P32969 192 aaKnown RBP13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 FLOT2Q14254 428 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 CSHL1Q14406 222 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 SH2D4BQ5SQS7 431 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 GDF6Q6KF10 455 aaPredicted RBP13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 POTEHQ6S545 545 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 CD300LGQ6UXG3 332 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 RANBP10Q6VN20 620 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 C14orf80Q86SX3 495 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 PQLC1Q8N2U9 271 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 SERPINI1Q99574 410 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 MRPL46Q9H2W6 279 aaKnown RBP13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 WDR41Q9HAD4 459 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 CYP4F12Q9HCS2 524 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 TREX1Q9NSU2 369 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 FBXO5Q9UKT4 447 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 PSMD13Q9UNM6 376 aa13.12□□□□□ -0.31
SRGAP2-209ENST00000604247 TRPM7Q96QT4 1865 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 SLCO1B7G3V0H7 640 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 ITGB1P05556 798 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 KCNA5P22460 613 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 HK2P52789 917 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 GEMP55040 296 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 FOLH1Q04609 750 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 BTBD8Q5XKL5 378 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 CXCL17Q6UXB2 119 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 TRIM67Q6ZTA4 783 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 LCA5Q86VQ0 697 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 C2CD4AQ8NCU7 369 aaPredicted RBP13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 HAPLN3Q96S86 360 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 PKMYT1Q99640 499 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 POMKQ9H5K3 350 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 TNFRSF12AQ9NP84 129 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 ENTPD7Q9NQZ7 604 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 GIT1Q9Y2X7 761 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 TCAF2A6NFQ2 919 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 TCN1P20061 433 aaPredicted RBP13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 CCR1P32246 355 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 CYP2C18P33260 490 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 CD151P48509 253 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 ZNF157P51786 506 aaPredicted RBP13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 ART3Q13508 389 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 OGFRL1Q5TC84 451 aaPredicted RBP13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 MANEALQ5VSG8 457 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 NEPROQ6NW34 567 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 ISLR2Q6UXK2 745 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 METTL23Q86XA0 190 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 GALNT15Q8N3T1 639 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 FAM156AQ8NDB6 213 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 ICA1LQ8NDH6 482 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 CCDC28BQ9BUN5 200 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 UBE2OQ9C0C9 1292 aaKnown RBP13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 CATSPERBQ9H7T0 1116 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 NMUR1Q9HB89 426 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 GTSE1Q9NYZ3 720 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 NCKIPSDQ9NZQ3 722 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 DTNAQ9Y4J8 743 aa13.11□□□□□ -0.31
SRGAP2-209ENST00000604247 SDHDO14521 159 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 PEX1O43933 1283 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 MGEA5O60502 916 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 GRIA2P42262 883 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms