RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 SMCO1Q147U7 214 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 RFX4Q33E94 735 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 C16orf46Q6P387 395 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 RASSF6Q6ZTQ3 369 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 GIPC3Q8TF64 312 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 ETNK2Q9NVF9 386 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SSR3Q9UNL2 185 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 TBC1D30Q9Y2I9 924 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 NTRK1P04629 796 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 ACAT1P24752 427 aaKnown RBP9.68□□□□□ -0.86
CSMD1-217ENST00000602723 CRADDP78560 199 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 PDK4Q16654 411 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 BAP1Q92560 729 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 PTGFRNQ9P2B2 879 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 STX16-NPEPL1H3BU86 382 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 STX16O14662 325 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 USP12O75317 370 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 IDO1P14902 403 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 USP45Q70EL2 814 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 TRAPPC5Q8IUR0 188 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 KAT5Q92993 513 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 LRRC14BA6NHZ5 514 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 FFAR3O14843 346 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 GPR42O15529 346 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 MAGEC1O60732 1142 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 TCEA3O75764 348 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 GTF2A2P52657 109 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 NAA20P61599 178 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 MAMLD1Q13495 774 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 MAPKAPK3Q16644 382 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 NEK5Q6P3R8 708 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 RD3Q7Z3Z2 195 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 SLCO6A1Q86UG4 719 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 OSMRQ99650 979 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 SLC4A5Q9BY07 1137 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 CCNB1IP1Q9NPC3 277 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 SAE1Q9UBE0 346 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-217ENST00000602723 LSM1O15116 133 aaKnown RBP9.68□□□□□ -0.86
CSMD1-217ENST00000602723 RIPK1Q13546 671 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 R3HCC1LQ7Z5L2 792 aaKnown RBP9.68□□□□□ -0.86
CSMD1-217ENST00000602723 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.68□□□□□ -0.86
CSMD1-217ENST00000602723 PARP8Q8N3A8 854 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 COL26A1Q96A83 441 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 EHD4Q9H223 541 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 NDOR1Q9UHB4 597 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 CLUHO75153 1309 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 FAM205AQ6ZU69 1335 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 CSDE1O75534 798 aaKnown RBP9.68□□□□□ -0.86
CSMD1-217ENST00000602723 ZNF135P52742 658 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-217ENST00000602723 ARMC12Q5T9G4 340 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 BICRALQ6AI39 1079 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 PGBD2Q6P3X8 592 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 TRPV1Q8NER1 839 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 CD101Q93033 1021 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 MRPL42Q9Y6G3 142 aaKnown RBP9.68□□□□□ -0.86
CSMD1-217ENST00000602723 LIPMQ5VYY2 423 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 AKAP7Q9P0M2 348 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-217ENST00000602723 PSME2Q9UL46 239 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 OR5F1O95221 314 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 CSF1RP07333 972 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 ABHD2P08910 425 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 ADSLP30566 484 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-217ENST00000602723 RPL3P39023 403 aaKnown RBP9.68□□□□□ -0.86
CSMD1-217ENST00000602723 HPS6Q86YV9 775 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 ATL1Q8WXF7 558 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 GSDMCQ9BYG8 508 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 ZNF879B4DU55 563 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 ZW10O43264 779 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 KCNQ2O43526 872 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 SEMA3DO95025 777 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 GMPSP49915 693 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-217ENST00000602723 RAB25P57735 213 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 SREBF2Q12772 1141 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 ZFP69Q49AA0 526 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 ULK3Q6PHR2 472 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 GPRIN3Q6ZVF9 776 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 FAR1Q8WVX9 515 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 C8orf4Q9NR00 106 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 SNCAIPQ9Y6H5 919 aa9.68□□□□□ -0.86
CSMD1-217ENST00000602723 PGRMC2O15173 223 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 SERPINA1P01009 418 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 RPL4P36578 427 aaKnown RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 OMPP47874 163 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 TTPAP49638 278 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 NAGLUP54802 743 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ZNHIT3Q15649 155 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 RETSATQ6NUM9 610 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 PAGE2Q7Z2X7 111 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 LENG9Q96B70 501 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 PPP1R14BQ96C90 147 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 GMCL1Q96IK5 515 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 FRMPD4Q14CM0 1322 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 SNX3O60493 162 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 KDELR1P24390 212 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 OR52K1Q8NGK4 314 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 AHCYL2Q96HN2 611 aaKnown RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 PPP3R2Q96LZ3 170 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 PCDHB12Q9Y5F1 795 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 PCDHGC5Q9Y5F6 944 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 PPP2R3BQ9Y5P8 575 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms