RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	OR2A12	Q8NGT7	310 aa		18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	RNF34	Q969K3	372 aa		18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	LIN37	Q96GY3	246 aa	Predicted RBP	18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	HDAC8	Q9BY41	377 aa		18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	TSPY26P	Q9H489	355 aa		18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	SEPT3	Q9UH03	358 aa		18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	ACSL6	Q9UKU0	697 aa		18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	TRPM6	Q9BX84	2022 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	RAD51B	O15315	384 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	TRUB2	O95900	331 aa	Known RBP	18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	MT-CO1	P00395	513 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	IGLV3-25	P01717	112 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	GLI1	P08151	1106 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	SRC	P12931	536 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	RABIF	P47224	123 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	RPIA	P49247	311 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	UBASH3A	P57075	661 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	FANCC	Q00597	558 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	CDR2	Q01850	454 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	EIF4EBP2	Q13542	120 aa	Predicted RBP	18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	SPIDR	Q14159	915 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	TBR1	Q16650	682 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	RABGAP1L	Q5R372	815 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	FBXL22	Q6P050	247 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	ZDHHC17	Q8IUH5	632 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	SLC35F3	Q8IY50	421 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	C18orf8	Q96DM3	657 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	CCDC3	Q9BQI4	270 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	DYRK4	Q9NR20	520 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	SEPT11	Q9NVA2	429 aa	Known RBP	18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	SLC12A6	Q9UHW9	1150 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	IPO11	Q9UI26	975 aa	Known RBP	18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	VPS28	Q9UK41	221 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251	HS3ST2	Q9Y278	367 aa		18.79	■□□□□ 0.6
LTBP4-231	ENST00000602251		A0A1W2PQC6	194 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	NTN3	O00634	580 aa	Predicted RBP	18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	SPINT1	O43278	529 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	HSF2BP	O75031	334 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	ERBB2	P04626	1255 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	CDH5	P33151	784 aa	Predicted RBP	18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	UGT1A5	P35504	534 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	PITX1	P78337	314 aa	Predicted RBP	18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	CDK17	Q00537	523 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	SLC6A3	Q01959	620 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	CENPC	Q03188	943 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	MAPK8IP2	Q13387	824 aa	Predicted RBP	18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	PTPN20	Q4JDL3	420 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	TPRG1L	Q5T0D9	272 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	NAA35	Q5VZE5	725 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	FAM183BP	Q6ZVS7	135 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	RAB11FIP2	Q7L804	512 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	B3GNT8	Q7Z7M8	397 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	JAML	Q86YT9	394 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	FBXO39	Q8N4B4	442 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	SLC20A1	Q8WUM9	679 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	CPA5	Q8WXQ8	436 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	GLMN	Q92990	594 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	NAT6	Q93015	286 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	ASNSD1	Q9NWL6	643 aa		18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	NOCT	Q9UK39	431 aa	Known RBP	18.78	■□□□□ 0.6
LTBP4-231	ENST00000602251	FAM170A	A1A519	330 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251		K7ERQ8	282 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	GCAT	O75600	419 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	GRAP2	O75791	330 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	PRNP	P04156	253 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	FER	P16591	822 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	IRAK1	P51617	712 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	RPS21	P63220	83 aa	Known RBP	18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	C1QBP	Q07021	282 aa	Known RBP	18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	EIF2B5	Q13144	721 aa	Known RBP	18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	EIF3I	Q13347	325 aa	Known RBP	18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	PDE1C	Q14123	709 aa	Predicted RBP	18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	NR1I3	Q14994	352 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	TAF5	Q15542	800 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	ARSI	Q5FYB1	569 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	TRIM72	Q6ZMU5	477 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	DEFB106A	Q8N104	65 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	ATP11C	Q8NB49	1132 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	CHST14	Q8NCH0	376 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	FEM1C	Q96JP0	617 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	CCDC114	Q96M63	670 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	RPRD1A	Q96P16	312 aa	Predicted RBP	18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	SLC25A18	Q9H1K4	315 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	FAM204A	Q9H8W3	233 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	EPB41L5	Q9HCM4	733 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	PADI4	Q9UM07	663 aa		18.77	■□□□□ 0.6
LTBP4-231	ENST00000602251	PPFIA2	O75334	1257 aa		18.76	■□□□□ 0.59
LTBP4-231	ENST00000602251	TPM3	P06753	285 aa		18.76	■□□□□ 0.59
LTBP4-231	ENST00000602251	ADK	P55263	362 aa	Known RBP	18.76	■□□□□ 0.59
LTBP4-231	ENST00000602251	RNASE9	P60153	205 aa	Known RBP	18.76	■□□□□ 0.59
LTBP4-231	ENST00000602251	KIAA1161	Q6NSJ0	714 aa		18.76	■□□□□ 0.59
LTBP4-231	ENST00000602251	OLFML1	Q6UWY5	402 aa		18.76	■□□□□ 0.59
LTBP4-231	ENST00000602251	RBFA	Q8N0V3	343 aa		18.76	■□□□□ 0.59
LTBP4-231	ENST00000602251	BTN2A2	Q8WVV5	523 aa		18.76	■□□□□ 0.59
LTBP4-231	ENST00000602251	KLF6	Q99612	283 aa	Predicted RBP	18.76	■□□□□ 0.59
LTBP4-231	ENST00000602251	TCEAL2	Q9H3H9	227 aa	Predicted RBP	18.76	■□□□□ 0.59
LTBP4-231	ENST00000602251	SYNDIG1	Q9H7V2	258 aa		18.76	■□□□□ 0.59
LTBP4-231	ENST00000602251	SPAST	Q9UBP0	616 aa		18.76	■□□□□ 0.59

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