RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 CDKAL1Q5VV42 579 aa13.36□□□□□ -0.27
RPS28-204ENST00000602140 ZNF354CQ86Y25 554 aa13.36□□□□□ -0.27
RPS28-204ENST00000602140 IFI44Q8TCB0 444 aa13.36□□□□□ -0.27
RPS28-204ENST00000602140 CENPIQ92674 756 aaPredicted RBP13.36□□□□□ -0.27
RPS28-204ENST00000602140 VOPP1Q96AW1 172 aa13.36□□□□□ -0.27
RPS28-204ENST00000602140 KLHL32Q96NJ5 620 aa13.36□□□□□ -0.27
RPS28-204ENST00000602140 DEPDC7Q96QD5 511 aa13.36□□□□□ -0.27
RPS28-204ENST00000602140 PCDHB18PQ96TA0 734 aa13.36□□□□□ -0.27
RPS28-204ENST00000602140 ABCG4Q9H172 646 aa13.36□□□□□ -0.27
RPS28-204ENST00000602140 USP29Q9HBJ7 922 aa13.36□□□□□ -0.27
RPS28-204ENST00000602140 EVA1BQ9NVM1 165 aa13.36□□□□□ -0.27
RPS28-204ENST00000602140 SPINT1O43278 529 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 AQP9O43315 295 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 BUB1O43683 1085 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 KDELR3O43731 214 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 USP12O75317 370 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 CSO75390 466 aaKnown RBP13.35□□□□□ -0.27
RPS28-204ENST00000602140 TMCC1O94876 653 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 MPOP05164 745 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 JUNDP17535 347 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 GPD1P21695 349 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 STAT1P42224 750 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 NSFP46459 744 aaKnown RBP13.35□□□□□ -0.27
RPS28-204ENST00000602140 PFN3P60673 137 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 EIF2B5Q13144 721 aaKnown RBP13.35□□□□□ -0.27
RPS28-204ENST00000602140 CDKN3Q16667 212 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 DEFB133Q30KQ1 61 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 LRRC73Q5JTD7 316 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 ZCCHC8Q6NZY4 707 aaKnown RBP13.35□□□□□ -0.27
RPS28-204ENST00000602140 WDR59Q6PJI9 974 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 GDPD4Q6W3E5 623 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 SLFN11Q7Z7L1 901 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 TTC7BQ86TV6 843 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 PYROXD2Q8N2H3 581 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 NETO2Q8NC67 525 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 DENND6BQ8NEG7 585 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 MAPK15Q8TD08 544 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 LMX1AQ8TE12 382 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 ASB12Q8WXK4 309 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 NTAN1Q96AB6 310 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 ARHGEF26Q96DR7 871 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 FCRL3Q96P31 734 aaPredicted RBP13.35□□□□□ -0.27
RPS28-204ENST00000602140 SELENOOQ9BVL4 669 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 OSBPL1AQ9BXW6 950 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 ADAM22Q9P0K1 906 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 SIK3Q9Y2K2 1263 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 CSNK1G3Q9Y6M4 447 aa13.35□□□□□ -0.27
RPS28-204ENST00000602140 CPED1A4D0V7 1026 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 ZSCAN5CA6NGD5 496 aaPredicted RBP13.34□□□□□ -0.27
RPS28-204ENST00000602140 AREL1O15033 823 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 PRB1P04280 392 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 THOP1P52888 689 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 GSCP56915 257 aaPredicted RBP13.34□□□□□ -0.27
RPS28-204ENST00000602140 GABREP78334 506 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 TLE3Q04726 772 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 CLEC16AQ2KHT3 1053 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 SCYL2Q6P3W7 929 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 GUSBP11Q6P575 273 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 SPACA3Q8IXA5 215 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 RBFAQ8N0V3 343 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 CENPTQ96BT3 561 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 NAF1Q96HR8 494 aaKnown RBP13.34□□□□□ -0.27
RPS28-204ENST00000602140 PCMTD1Q96MG8 357 aaPredicted RBP13.34□□□□□ -0.27
RPS28-204ENST00000602140 GDAP1L1Q96MZ0 367 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 TTYH3Q9C0H2 523 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 KLC2Q9H0B6 622 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 NOL6Q9H6R4 1146 aaKnown RBP13.34□□□□□ -0.27
RPS28-204ENST00000602140 FANCLQ9NW38 375 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 DAAM1Q9Y4D1 1078 aa13.34□□□□□ -0.27
RPS28-204ENST00000602140 ASXL3Q9C0F0 2248 aa13.33□□□□□ -0.27
RPS28-204ENST00000602140 CHD5Q8TDI0 1954 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 MMP20O60882 483 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 IGSF6O95976 241 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 CALB1P05937 261 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 ITIH2P19823 946 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 TGM2P21980 687 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 EPHB2P29323 1055 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 IGFALSP35858 605 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 RAD51Q06609 339 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 PTK2BQ14289 1009 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 SYCP1Q15431 976 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 EFHC2Q5JST6 749 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 EFL1Q7Z2Z2 1120 aaKnown RBP13.33□□□□□ -0.28
RPS28-204ENST00000602140 VPS36Q86VN1 386 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 PHF13Q86YI8 300 aaPredicted RBP13.33□□□□□ -0.28
RPS28-204ENST00000602140 LSMEM2Q8N112 164 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 RTL3Q8N8U3 475 aaKnown RBP13.33□□□□□ -0.28
RPS28-204ENST00000602140 C3orf20Q8ND61 904 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 ZNF248Q8NDW4 579 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 CXorf40AQ8TE69 158 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 BTN2A2Q8WVV5 523 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 SLC39A7Q92504 469 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 HMCESQ96FZ2 354 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 ZNF578Q96N58 590 aaPredicted RBP13.33□□□□□ -0.28
RPS28-204ENST00000602140 LGMNQ99538 433 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 IL12RB2Q99665 862 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 TCEAL2Q9H3H9 227 aaPredicted RBP13.33□□□□□ -0.28
RPS28-204ENST00000602140 SEPT11Q9NVA2 429 aaKnown RBP13.33□□□□□ -0.28
RPS28-204ENST00000602140 NCKIPSDQ9NZQ3 722 aa13.33□□□□□ -0.28
RPS28-204ENST00000602140 SPASTQ9UBP0 616 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms