RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 RGRP47804 291 aa18.21■□□□□ 0.51
VRK3-225ENST00000601912 CDK18Q07002 472 aa18.21■□□□□ 0.51
VRK3-225ENST00000601912 FCHO2Q0JRZ9 810 aa18.21■□□□□ 0.51
VRK3-225ENST00000601912 DENND5AQ6IQ26 1287 aa18.21■□□□□ 0.51
VRK3-225ENST00000601912 SMRP1Q8NCR6 262 aa18.21■□□□□ 0.51
VRK3-225ENST00000601912 EPS8L3Q8TE67 593 aaKnown RBP18.21■□□□□ 0.51
VRK3-225ENST00000601912 ELSPBP1Q96BH3 223 aa18.21■□□□□ 0.51
VRK3-225ENST00000601912 STMN4Q9H169 189 aaPredicted RBP18.21■□□□□ 0.51
VRK3-225ENST00000601912 POMKQ9H5K3 350 aa18.21■□□□□ 0.51
VRK3-225ENST00000601912 BCCIPQ9P287 314 aaKnown RBP eCLIP18.21■□□□□ 0.51
VRK3-225ENST00000601912 LHX3Q9UBR4 397 aa18.21■□□□□ 0.51
VRK3-225ENST00000601912 FETUBQ9UGM5 382 aa18.21■□□□□ 0.51
VRK3-225ENST00000601912 FBXO10Q9UK96 956 aa18.21■□□□□ 0.51
VRK3-225ENST00000601912 ARIH1Q9Y4X5 557 aaPredicted RBP18.21■□□□□ 0.51
VRK3-225ENST00000601912 LOC285095A0A1B0GVY8 99 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 RGS16O15492 202 aaPredicted RBP18.2■□□□□ 0.5
VRK3-225ENST00000601912 RNF40O75150 1001 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 GJB3O75712 270 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 PSMC3P17980 439 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 POLR2EP19388 210 aaKnown RBP18.2■□□□□ 0.5
VRK3-225ENST00000601912 HLA-DPA1P20036 260 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 OAS2P29728 719 aaKnown RBP18.2■□□□□ 0.5
VRK3-225ENST00000601912 DGKGP49619 791 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 ECT2LQ008S8 904 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 SLC1A5Q15758 541 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 PCID2Q5JVF3 399 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 ARMC3Q5W041 872 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 STEAP4Q687X5 459 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 KIAA0907Q7Z7F0 614 aaPredicted RBP18.2■□□□□ 0.5
VRK3-225ENST00000601912 CPA6Q8N4T0 437 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 SLC25A41Q8N5S1 370 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 ARL8AQ96BM9 186 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 PGM2Q96G03 612 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 ECT2Q9H8V3 914 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 CD207Q9UJ71 328 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 HS3ST2Q9Y278 367 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 TRIOBPQ9H2D6 2365 aa18.2■□□□□ 0.5
VRK3-225ENST00000601912 FAM237BA0A1B0GVD1 139 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 HMGB1P1B2RPK0 211 aaPredicted RBP18.19■□□□□ 0.5
VRK3-225ENST00000601912 K7ERQ8 282 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 CDH16O75309 829 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 CA4P22748 312 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 MAPK8P45983 427 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 AP1S1P61966 158 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 IHHQ14623 411 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 SPANXN3Q5MJ09 141 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 AGBL2Q5U5Z8 902 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 MBLAC2Q68D91 279 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 CYS1Q717R9 158 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 ADIPOR2Q86V24 386 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 RNF135Q8IUD6 432 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 RIBC1Q8N443 379 aaPredicted RBP18.19■□□□□ 0.5
VRK3-225ENST00000601912 PPHLN1Q8NEY8 458 aaKnown RBP18.19■□□□□ 0.5
VRK3-225ENST00000601912 ST13P5Q8NFI4 369 aaPredicted RBP18.19■□□□□ 0.5
VRK3-225ENST00000601912 WFIKKN2Q8TEU8 576 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 PTCD2Q8WV60 388 aaKnown RBP18.19■□□□□ 0.5
VRK3-225ENST00000601912 ATP6V1G3Q96LB4 118 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 FAM161BQ96MY7 647 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 SLC24A2Q9UI40 661 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 SOX13Q9UN79 622 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 RPS6KL1Q9Y6S9 549 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 DOCK8Q8NF50 2099 aa18.19■□□□□ 0.5
VRK3-225ENST00000601912 POC1B-GALNT4F8VUJ3 575 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 SMAD6O43541 496 aaKnown RBP18.18■□□□□ 0.5
VRK3-225ENST00000601912 ECI2O75521 394 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 USP1O94782 785 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 FGF1P05230 155 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 CTSOP43234 321 aaPredicted RBP18.18■□□□□ 0.5
VRK3-225ENST00000601912 CHRNA4P43681 627 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 CRYMQ14894 314 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 TTMPQ5BVD1 217 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 NCEH1Q6PIU2 408 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 MTSS1LQ765P7 747 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 SRLQ86TD4 932 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 TTC17Q96AE7 1141 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 ISG20Q96AZ6 181 aaKnown RBP18.18■□□□□ 0.5
VRK3-225ENST00000601912 RPL10LQ96L21 214 aaKnown RBP18.18■□□□□ 0.5
VRK3-225ENST00000601912 KXD1Q9BQD3 176 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 KIFC1Q9BW19 673 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 SLC27A6Q9Y2P4 619 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 TULP3O75386 442 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 NDST3O95803 873 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 IGSF6O95976 241 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 CISD3P0C7P0 127 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 SRCP12931 536 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 PRKCHP24723 683 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 ADRA1DP25100 572 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 ATP5DP30049 168 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 NNMTP40261 264 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 CSNK1DP48730 415 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 SNRPD1P62314 119 aaKnown RBP18.18■□□□□ 0.5
VRK3-225ENST00000601912 GRM2Q14416 872 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 POU6F1Q14863 301 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 SIRPB2Q5JXA9 342 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 PARM1Q6UWI2 310 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 TMEM135Q86UB9 458 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 TDRPQ86YL5 185 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 SH2D3CQ8N5H7 860 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 TM6SF2Q9BZW4 377 aa18.18■□□□□ 0.5
VRK3-225ENST00000601912 CEP44Q9C0F1 390 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms