RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 GP1BAP07359 652 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 EPHB2P29323 1055 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 DUSP3P51452 185 aaPredicted RBP17.24■□□□□ 0.35
SCAF1-204ENST00000601038 ZNF143P52747 638 aaPredicted RBP17.24■□□□□ 0.35
SCAF1-204ENST00000601038 UBXN1Q04323 297 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 RAD51Q06609 339 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 C1QBPQ07021 282 aaKnown RBP17.24■□□□□ 0.35
SCAF1-204ENST00000601038 INO80DQ53TQ3 878 aaPredicted RBP17.24■□□□□ 0.35
SCAF1-204ENST00000601038 EFHC2Q5JST6 749 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 LEKR1Q6ZMV7 388 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 MON1BQ7L1V2 547 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 TTC7BQ86TV6 843 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 PYROXD2Q8N2H3 581 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 DENND6BQ8NEG7 585 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 SNIP1Q8TAD8 396 aaKnown RBP17.24■□□□□ 0.35
SCAF1-204ENST00000601038 CASKIN2Q8WXE0 1202 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 KLHL32Q96NJ5 620 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 ERGIC2Q96RQ1 377 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 NOL6Q9H6R4 1146 aaKnown RBP17.24■□□□□ 0.35
SCAF1-204ENST00000601038 ANO10Q9NW15 660 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 GGT7Q9UJ14 662 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 CELSR3Q9NYQ7 3312 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 LY6G6EA0A0G2JKS1 128 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 RRP8O43159 456 aaKnown RBP17.23■□□□□ 0.35
SCAF1-204ENST00000601038 SPINT1O43278 529 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 OPA1O60313 960 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 NEBLO76041 1014 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 TMCC1O94876 653 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 ITPKBP27987 946 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 AIF1P55008 147 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 YBEYP58557 167 aaPredicted RBP17.23■□□□□ 0.35
SCAF1-204ENST00000601038 PFN3P60673 137 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 MYL5Q02045 173 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 PDE1CQ14123 709 aaPredicted RBP17.23■□□□□ 0.35
SCAF1-204ENST00000601038 ACAP1Q15027 740 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 ATXN7L2Q5T6C5 722 aaPredicted RBP17.23■□□□□ 0.35
SCAF1-204ENST00000601038 CDCP2Q5VXM1 449 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 SCYL2Q6P3W7 929 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 SASS6Q6UVJ0 657 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 GDPD4Q6W3E5 623 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 KDM7AQ6ZMT4 941 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 LRRC69Q6ZNQ3 347 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 ZNF354CQ86Y25 554 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 ZNF548Q8NEK5 533 aaPredicted RBP17.23■□□□□ 0.35
SCAF1-204ENST00000601038 FGF11Q92914 225 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 CENPTQ96BT3 561 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 CRELD1Q96HD1 420 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 GDAP1L1Q96MZ0 367 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 AGPAT1Q99943 283 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 TTYH3Q9C0H2 523 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 SEPT11Q9NVA2 429 aaKnown RBP17.23■□□□□ 0.35
SCAF1-204ENST00000601038 KLF15Q9UIH9 416 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 ITM2BQ9Y287 266 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 MFHAS1Q9Y4C4 1052 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 U3KQA8 63 aa17.23■□□□□ 0.35
SCAF1-204ENST00000601038 ANKRD62A6NC57 917 aa17.22■□□□□ 0.35
SCAF1-204ENST00000601038 WASH4PA8MWX3 477 aa17.22■□□□□ 0.35
SCAF1-204ENST00000601038 RIOK3O14730 519 aaKnown RBP17.22■□□□□ 0.35
SCAF1-204ENST00000601038 CCP110O43303 1012 aa17.22■□□□□ 0.35
SCAF1-204ENST00000601038 BRINP1O60477 761 aa17.22■□□□□ 0.35
SCAF1-204ENST00000601038 JUNDP17535 347 aa17.22■□□□□ 0.35
SCAF1-204ENST00000601038 CDK11BP21127 795 aaKnown RBP17.22■□□□□ 0.35
SCAF1-204ENST00000601038 ACTN2P35609 894 aa17.22■□□□□ 0.35
SCAF1-204ENST00000601038 RPL7AP62424 266 aaKnown RBP17.22■□□□□ 0.35
SCAF1-204ENST00000601038 TPRG1LQ5T0D9 272 aa17.22■□□□□ 0.35
SCAF1-204ENST00000601038 ZCCHC8Q6NZY4 707 aaKnown RBP17.22■□□□□ 0.35
SCAF1-204ENST00000601038 DNAJC24Q6P3W2 148 aa17.22■□□□□ 0.35
SCAF1-204ENST00000601038 BAP1Q92560 729 aa17.22■□□□□ 0.35
SCAF1-204ENST00000601038 CATSPERBQ9H7T0 1116 aa17.22■□□□□ 0.35
SCAF1-204ENST00000601038 NCKIPSDQ9NZQ3 722 aa17.22■□□□□ 0.35
SCAF1-204ENST00000601038 DKK3Q9UBP4 350 aa17.22■□□□□ 0.35
SCAF1-204ENST00000601038 FZD10Q9ULW2 581 aa17.22■□□□□ 0.35
SCAF1-204ENST00000601038 LAMA5O15230 3695 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 RASA4BC9J798 803 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 TPP1O14773 563 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 AQP9O43315 295 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 RASA4O43374 803 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 CREB3O43889 395 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 IGSF6O95976 241 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 CCDC172P0C7W6 258 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 MYF5P13349 255 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 RHOAP61586 193 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 EIF2B5Q13144 721 aaKnown RBP17.21■□□□□ 0.35
SCAF1-204ENST00000601038 SERINC3Q13530 473 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 PTK2BQ14289 1009 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 STX1AQ16623 288 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 PARP15Q460N3 678 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 PPP1R15BQ5SWA1 713 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 UMODL1-AS1Q8N2C9 162 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 BTN2A2Q8WVV5 523 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 HMCESQ96FZ2 354 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 MCEEQ96PE7 176 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 BBC3Q96PG8 261 aaPredicted RBP17.21■□□□□ 0.35
SCAF1-204ENST00000601038 DEPDC7Q96QD5 511 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 EPAS1Q99814 870 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 CNPY3Q9BT09 278 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 CPEB1Q9BZB8 566 aaKnown RBP17.21■□□□□ 0.35
SCAF1-204ENST00000601038 KLC2Q9H0B6 622 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 ABCG4Q9H172 646 aa17.21■□□□□ 0.35
SCAF1-204ENST00000601038 SALL4Q9UJQ4 1053 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms