RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 LINC01565O15544 149 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 TYRP14679 529 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 ADRA1DP25100 572 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 SCNN1BP51168 640 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 CDK18Q07002 472 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 RALGPS1Q5JS13 557 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 FAM78AQ5JUQ0 283 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 LY6G5CQ5SRR4 150 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 CTAGE3PQ8IX95 158 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 SLC25A41Q8N5S1 370 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 PPM1NQ8N819 430 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 PPHLN1Q8NEY8 458 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 CDKL2Q92772 493 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 ASB16Q96NS5 453 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 FCRL3Q96P31 734 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 LRRC3BQ96PB8 259 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 SLC2A11Q9BYW1 496 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 ZNF576Q9H609 170 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 CHRAC1Q9NRG0 131 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 ABCB8Q9NUT2 735 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 DUS2Q9NX74 493 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 ZNF180Q9UJW8 692 aa17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 ARIH1Q9Y4X5 557 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-224ENST00000600718 CHD7Q9P2D1 2997 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 CXorf49A8MYA2 514 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 PIAS1O75925 651 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 HLA-DPA1P20036 260 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 CHRNA4P43681 627 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 RGRP47804 291 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 SERPINH1P50454 418 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 MGAT5Q09328 741 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 ADAM15Q13444 863 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 NAB1Q13506 487 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 PITRM1Q5JRX3 1037 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 CES3Q6UWW8 571 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 SRLQ86TD4 932 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 OSCP1Q8WVF1 389 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 ZNF669Q96BR6 464 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 TRPV4Q9HBA0 871 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 SMYD2Q9NRG4 433 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 OBP2AQ9NY56 170 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 LHX3Q9UBR4 397 aa17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 INTS6Q9UL03 887 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-224ENST00000600718 ZCWPW2A0A1B0GU75 182 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 GJB3O75712 270 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 KRT15P19012 456 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 HLA-FP30511 346 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 VIPR2P41587 438 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 RHOAP61586 193 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 DMC1Q14565 340 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 POU6F1Q14863 301 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 SIRPB2Q5JXA9 342 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 BPIFB1Q8TDL5 484 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 RANBP9Q96S59 729 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 CNOT10Q9H9A5 744 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 PPANQ9NQ55 473 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 SENP1Q9P0U3 644 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 PRKAG3Q9UGI9 489 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 TCAF1Q9Y4C2 921 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 IQANK1A0A1B0GTG1 560 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 ATP1A2P50993 1020 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 ATAT1Q5SQI0 421 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 LGSNQ5TDP6 509 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 GET4Q7L5D6 327 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 TRABD2AQ86V40 505 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 CNPY4Q8N129 248 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 RSPRY1Q96DX4 576 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 MFSD3Q96ES6 412 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 CERS2Q96G23 380 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 PRO3102Q9H379 93 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 GGA2Q9UJY4 613 aa17.84■□□□□ 0.45
SHKBP1-224ENST00000600718 A6NNZ2 444 aa17.83■□□□□ 0.44
SHKBP1-224ENST00000600718 NDST3O95803 873 aa17.83■□□□□ 0.44
SHKBP1-224ENST00000600718 MT-CO1P00395 513 aa17.83■□□□□ 0.44
SHKBP1-224ENST00000600718 FGF1P05230 155 aa17.83■□□□□ 0.44
SHKBP1-224ENST00000600718 ATXN1LP0C7T5 689 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-224ENST00000600718 NMBRP28336 390 aa17.83■□□□□ 0.44
SHKBP1-224ENST00000600718 MSLNQ13421 630 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-224ENST00000600718 DHCR24Q15392 516 aa17.83■□□□□ 0.44
SHKBP1-224ENST00000600718 TUBB8Q3ZCM7 444 aa17.83■□□□□ 0.44
SHKBP1-224ENST00000600718 NCEH1Q6PIU2 408 aa17.83■□□□□ 0.44
SHKBP1-224ENST00000600718 MARK2Q7KZI7 788 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-224ENST00000600718 EXOC2Q96KP1 924 aa17.83■□□□□ 0.44
SHKBP1-224ENST00000600718 FCF1Q9Y324 198 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-224ENST00000600718 HEATR9A2RTY3 570 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 PABPC1P11940 636 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 ALADP13716 330 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 CSNK1DP48730 415 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 SERPINB9P50453 376 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 SULT2A1Q06520 285 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 LAMB3Q13751 1172 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 EML3Q32P44 896 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 ASTLQ6HA08 431 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 SRRM1Q8IYB3 904 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 UNC5BQ8IZJ1 945 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 TRIB3Q96RU7 358 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 CDH7Q9ULB5 785 aa17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 NUP210Q8TEM1 1887 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-224ENST00000600718 ADH1CP00326 375 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms