RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 PIP4K2CQ8TBX8 421 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 HMGB4Q8WW32 186 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 FBRSQ9HAH7 460 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 CD93Q9NPY3 652 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 FARP1Q9Y4F1 1045 aaPredicted RBP20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 MRFAP1Q9Y605 127 aa20.26■□□□□ 0.83
SHKBP1-222ENST00000600320 APBB3O95704 486 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 IL1BP01584 269 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 C7P10643 843 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 TDGF1P13385 188 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 STIP1P31948 543 aaKnown RBP20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 AP1S1P61966 158 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 C2orf54Q08AI8 447 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 CST6Q15828 149 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 CCDC137Q6PK04 289 aaKnown RBP20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 KIAA1324Q6UXG2 1013 aaKnown RBP20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 RASSF3Q86WH2 238 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 CAMK1DQ8IU85 385 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 C1orf210Q8IVY1 113 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 KLHL7Q8IXQ5 586 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 ARRDC3Q96B67 414 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 FERMT1Q9BQL6 677 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 GORASP1Q9BQQ3 440 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 SLC25A51Q9H1U9 297 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 TRHDEQ9UKU6 1024 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 CACNA1IQ9P0X4 2223 aa20.25■□□□□ 0.83
SHKBP1-222ENST00000600320 PLK4O00444 970 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 MID1O15344 667 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 LAMTOR5O43504 91 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 GCATO75600 419 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 ZNF189O75820 626 aaPredicted RBP20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 STK10O94804 968 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 METTL18O95568 372 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 IFNB1P01574 187 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 PRNPP04156 253 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 UGT2B4P06133 528 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 SLC8A1P32418 973 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 CD86P42081 329 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 FNTAP49354 379 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 SKOR1P84550 965 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 TRAF2Q12933 501 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 WHAMMP3Q1A5X7 153 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 GDPD4Q6W3E5 623 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 ZNF572Q7Z3I7 529 aaPredicted RBP20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 DSG4Q86SJ6 1040 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 PRPF39Q86UA1 669 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 TMIEQ8NEW7 156 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 SPATA4Q8NEY3 305 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 ATL2Q8NHH9 583 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 SPATA22Q8NHS9 363 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 PRCCQ92733 491 aaPredicted RBP20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 TADA1Q96BN2 335 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 SIPA1Q96FS4 1042 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 IMP4Q96G21 291 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 FCRL5Q96RD9 977 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 LRFN3Q9BTN0 628 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 CPEB1Q9BZB8 566 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 GBA3Q9H227 469 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 EBF1Q9UH73 591 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 RSPH14Q9UHP6 348 aa20.24■□□□□ 0.83
SHKBP1-222ENST00000600320 CCDC188H7C350 402 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 OPHN1O60890 802 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 RNASEH1O60930 286 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 ALDH1A2O94788 518 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 PSMB4P28070 264 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 RAD51Q06609 339 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 CKAP4Q07065 602 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 P3H1Q32P28 736 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 RALGPS1Q5JS13 557 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 FAXCQ5TGI0 409 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 ZSWIM9Q86XI8 627 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 PGBD3Q8N328 593 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 TAB3Q8N5C8 712 aaPredicted RBP20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 CAMKK1Q8N5S9 505 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 OXNAD1Q96HP4 312 aaPredicted RBP20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 LRIG1Q96JA1 1093 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 KLHL32Q96NJ5 620 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 TUBGCP5Q96RT8 1024 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 RBM15Q96T37 977 aaKnown RBP eCLIP20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 TPSD1Q9BZJ3 242 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 PABPC3Q9H361 631 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 HAUS2Q9NVX0 235 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 BCCIPQ9P287 314 aaKnown RBP eCLIP20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 PCDHGC4Q9Y5F7 938 aa20.23■□□□□ 0.83
SHKBP1-222ENST00000600320 ANKRD36A6QL64 1941 aa20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 C1QTNF3-AMACRE9PGA6 284 aa20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 KPNA3O00505 521 aaPredicted RBP20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 TRAFD1O14545 582 aaPredicted RBP20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 MT-CYBP00156 380 aaPredicted RBP20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 RPL22P35268 128 aaKnown RBP20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 DRD3P35462 400 aa20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 PTGIRP43119 386 aa20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 MAPK8P45983 427 aa20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 ITPRIPL1Q6GPH6 555 aa20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 GSTA5Q7RTV2 222 aa20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 AADATQ8N5Z0 425 aa20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 MLPHQ9BV36 600 aaPredicted RBP20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 SUV39H2Q9H5I1 410 aa20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 UBP1Q9NZI7 540 aa20.22■□□□□ 0.83
SHKBP1-222ENST00000600320 SERGEFQ9UGK8 458 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms