RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 GNA14O95837 355 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 F9P00740 461 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 ITGA2BP08514 1039 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 TSHRP16473 764 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 WT1P19544 449 aaPredicted RBP6.21□□□□□ -1.42
VRK3-220ENST00000600259 PON1P27169 355 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 OR1E1P30953 314 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 SLC5A2P31639 672 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 IGFALSP35858 605 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 FLT3P36888 993 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 ACVRL1P37023 503 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 SCNN1AP37088 669 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 PPP1R2P41236 205 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 YPEL5P62699 121 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 CCL7P80098 99 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 GNA12Q03113 381 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 ZFP36L1Q07352 338 aaKnown RBP6.21□□□□□ -1.42
VRK3-220ENST00000600259 SGCGQ13326 291 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 ARHGAP44Q17R89 818 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 SLC25A52Q3SY17 297 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 RAB6CQ53S08 254 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 ZNF805Q5CZA5 627 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 PRRT3Q5FWE3 981 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 C6orf132Q5T0Z8 1188 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 MANEALQ5VSG8 457 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 KLHL10Q6JEL2 608 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 RETSATQ6NUM9 610 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 SLC47A2Q86VL8 602 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 ZSCAN30Q86W11 494 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 NLRP14Q86W24 1093 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 FAM71AQ8IYT1 594 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 PHACTR4Q8IZ21 702 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 ARL14Q8N4G2 192 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 TP53I13Q8NBR0 393 aaPredicted RBP6.21□□□□□ -1.42
VRK3-220ENST00000600259 WDR48Q8TAF3 677 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 BTN2A2Q8WVV5 523 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 RAB7BQ96AH8 199 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 CCDC34Q96HJ3 373 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 PPP1R16AQ96I34 528 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 HAPLN3Q96S86 360 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 TBCBQ99426 244 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 IL12RB2Q99665 862 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 SEMA3CQ99985 751 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 CCDC3Q9BQI4 270 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 SPON2Q9BUD6 331 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 LRRC61Q9BV99 259 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 RAB6CQ9H0N0 254 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 PLCB1Q9NQ66 1216 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 EVA1BQ9NVM1 165 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.21□□□□□ -1.42
VRK3-220ENST00000600259 HECAQ9UBI9 543 aaPredicted RBP6.21□□□□□ -1.42
VRK3-220ENST00000600259 SPASTQ9UBP0 616 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 IPO11Q9UI26 975 aaKnown RBP6.21□□□□□ -1.42
VRK3-220ENST00000600259 TMEM59LQ9UK28 342 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 PADI4Q9UM07 663 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 NEU3Q9UQ49 428 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 ITM2BQ9Y287 266 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 FCF1Q9Y324 198 aaKnown RBP6.21□□□□□ -1.42
VRK3-220ENST00000600259 ATP6V1DQ9Y5K8 247 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 NYNRINQ9P2P1 1898 aaKnown RBP6.21□□□□□ -1.42
VRK3-220ENST00000600259 BSNQ9UPA5 3926 aa6.21□□□□□ -1.42
VRK3-220ENST00000600259 TEX15Q9BXT5 2789 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 GTPBP10A4D1E9 387 aaKnown RBP6.2□□□□□ -1.42
VRK3-220ENST00000600259 FAM72CH0Y354 149 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 H3BM21 787 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 PLD2O14939 933 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 NVLO15381 856 aaKnown RBP6.2□□□□□ -1.42
VRK3-220ENST00000600259 MMP20O60882 483 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 SRGAP2O75044 1071 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 POP4O95707 220 aaKnown RBP6.2□□□□□ -1.42
VRK3-220ENST00000600259 ANXA6P08133 673 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 PNMA6AP0CW24 399 aaPredicted RBP6.2□□□□□ -1.42
VRK3-220ENST00000600259 TIMP2P16035 220 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 CCKBRP32239 447 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 UGT1A5P35504 534 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 EIF4A3P38919 411 aaKnown RBP6.2□□□□□ -1.42
VRK3-220ENST00000600259 USP8P40818 1118 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 RECQLP46063 649 aaPredicted RBP6.2□□□□□ -1.42
VRK3-220ENST00000600259 DNA2P51530 1060 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 RNASE9P60153 205 aaKnown RBP6.2□□□□□ -1.42
VRK3-220ENST00000600259 NFKB2Q00653 900 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 NRG1Q02297 640 aaPredicted RBP6.2□□□□□ -1.42
VRK3-220ENST00000600259 PTK2Q05397 1052 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 DEUP1Q05D60 604 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 NFATC3Q12968 1075 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 STIM1Q13586 685 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 MYLK3Q32MK0 819 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 COLEC12Q5KU26 742 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 ACBD5Q5T8D3 534 aaPredicted RBP6.2□□□□□ -1.42
VRK3-220ENST00000600259 FAM72AQ5TYM5 149 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 KCTD16Q68DU8 428 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 FAM72DQ6L9T8 149 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 FOXR1Q6PIV2 292 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 OGFOD3Q6PK18 319 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 LVRNQ6Q4G3 990 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 LRRC31Q6UY01 552 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 FAM72BQ86X60 149 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 DTX1Q86Y01 620 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 XYLT1Q86Y38 959 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 ZDHHC17Q8IUH5 632 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms