RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 CSF2P04141 144 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 RHOQP17081 205 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 JUNDP17535 347 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 EEF1GP26641 437 aaKnown RBP12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 ACTN2P35609 894 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 SOX5P35711 763 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 RABIFP47224 123 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 MAPKAPK2P49137 400 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 PFN3P60673 137 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 CXADRP78310 365 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 NRG1Q02297 640 aaPredicted RBP12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 C1orf61Q13536 156 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 TCEA2Q15560 299 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 ZNF805Q5CZA5 627 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 PERM1Q5SV97 790 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 ACBD5Q5T8D3 534 aaPredicted RBP12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 NYAP1Q6ZVC0 841 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 VPS36Q86VN1 386 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 ZNF354CQ86Y25 554 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 OR2AP1Q8NGE2 309 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 LMX1AQ8TE12 382 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 SLC39A7Q92504 469 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 ISG20Q96AZ6 181 aaKnown RBP12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 TBC1D31Q96DN5 1066 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 IFT43Q96FT9 208 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 EXOC2Q96KP1 924 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 DEPDC7Q96QD5 511 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 LGMNQ99538 433 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 C1QTNF2Q9BXJ5 285 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 CPED1A4D0V7 1026 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 H3BM21 787 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 NEMP1O14524 444 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 FPGTO14772 594 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 ATXN7O15265 892 aaPredicted RBP12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 INSIG1O15503 277 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 CCP110O43303 1012 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 AQP9O43315 295 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 RAMP2O60895 175 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 GCATO75600 419 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 GSRP00390 522 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 CELA2BP08218 269 aaPredicted RBP12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 PLEKP08567 350 aaPredicted RBP12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 UNGP13051 313 aaPredicted RBP12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 GPD1P21695 349 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 RFC1P35251 1148 aaPredicted RBP12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 PTPN9P43378 593 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 SNRPD1P62314 119 aaKnown RBP12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 SGCGQ13326 291 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 ARL13BQ3SXY8 428 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 C3orf38Q5JPI3 329 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 CDKAL1Q5VV42 579 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 ZCCHC8Q6NZY4 707 aaKnown RBP12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 PCSK4Q6UW60 755 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 STRADAQ7RTN6 431 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 EFL1Q7Z2Z2 1120 aaKnown RBP12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 ZNF677Q86XU0 584 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 FAM181AQ8N9Y4 354 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 MAPK15Q8TD08 544 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 CENPIQ92674 756 aaPredicted RBP12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 WRAP53Q9BUR4 548 aaKnown RBP12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 LRRC61Q9BV99 259 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 MAGEH1Q9H213 219 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 MBNL1Q9NR56 388 aaKnown RBP12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 IPO11Q9UI26 975 aaKnown RBP12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 SATB2Q9UPW6 733 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 SIK3Q9Y2K2 1263 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 COQ6Q9Y2Z9 468 aa12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 ZNF106Q9H2Y7 1883 aaKnown RBP12.27□□□□□ -0.45
SOX2-OT-228ENST00000597828 SDK2Q58EX2 2172 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 NEMP2A6NFY4 417 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 AREL1O15033 823 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 TSPAN6O43657 245 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 BUB1O43683 1085 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 KDELR3O43731 214 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 MMP20O60882 483 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 PIGNO95427 931 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 GP1BAP07359 652 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 ETFBP38117 255 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 PCBP4P57723 403 aaKnown RBP12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 POLD3Q15054 466 aaPredicted RBP12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 ISXQ2M1V0 245 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 MYLK3Q32MK0 819 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 WDR59Q6PJI9 974 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 GDPD4Q6W3E5 623 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 DCP2Q8IU60 420 aaKnown RBP12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 SLC35F3Q8IY50 421 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 PHACTR4Q8IZ21 702 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 TP53I13Q8NBR0 393 aaPredicted RBP12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 DENND6BQ8NEG7 585 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 FAM174AQ8TBP5 190 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 NTAN1Q96AB6 310 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 RAB7BQ96AH8 199 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 CENPTQ96BT3 561 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 HMCESQ96FZ2 354 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 ATXN7L3BQ96GX2 97 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 LENG8Q96PV6 779 aaPredicted RBP12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 DUSP23Q9BVJ7 150 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 SELENOOQ9BVL4 669 aa12.26□□□□□ -0.45
SOX2-OT-228ENST00000597828 CPNE5Q9HCH3 593 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms