RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 SRLQ86TD4 932 aa16.98■□□□□ 0.31
CAPN12-206ENST00000597354 TBC1D3Q8IZP1 549 aaPredicted RBP16.98■□□□□ 0.31
CAPN12-206ENST00000597354 PPP1R16AQ96I34 528 aa16.98■□□□□ 0.31
CAPN12-206ENST00000597354 NSMCE3Q96MG7 304 aa16.98■□□□□ 0.31
CAPN12-206ENST00000597354 NT5MQ9NPB1 228 aa16.98■□□□□ 0.31
CAPN12-206ENST00000597354 TNRC6BQ9UPQ9 1833 aaKnown RBP16.98■□□□□ 0.31
CAPN12-206ENST00000597354 EP300Q09472 2414 aaPredicted RBP16.97■□□□□ 0.31
CAPN12-206ENST00000597354 LRRC72A6NJI9 287 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 C16orf96A6NNT2 1141 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 PATE3B3GLJ2 98 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 DDX3YO15523 660 aaKnown RBP16.97■□□□□ 0.31
CAPN12-206ENST00000597354 MX2P20592 715 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 CCNCP24863 283 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 MMP13P45452 471 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 TAS2R38P59533 333 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 ITKQ08881 620 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 AP1B1Q10567 949 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 ZNF805Q5CZA5 627 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 SPDYCQ5MJ68 293 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 TCEAL6Q6IPX3 200 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 FBXL19Q6PCT2 694 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 ERN2Q76MJ5 926 aaKnown RBP16.97■□□□□ 0.31
CAPN12-206ENST00000597354 CAMK1DQ8IU85 385 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 LRRC49Q8IUZ0 686 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 CCDC13Q8IYE1 715 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 CADM4Q8NFZ8 388 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 OR2T34Q8NGX1 318 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 FOXJ1Q92949 421 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 TCEAL3Q969E4 200 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 BIRC7Q96CA5 298 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 TSGA13Q96PP4 275 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 PSKH2Q96QS6 385 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 EIF2B4Q9UI10 523 aaKnown RBP16.97■□□□□ 0.31
CAPN12-206ENST00000597354 TTLL3Q9Y4R7 772 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 SLCO1B1Q9Y6L6 691 aa16.97■□□□□ 0.31
CAPN12-206ENST00000597354 RIF1Q5UIP0 2472 aaKnown RBP16.96■□□□□ 0.31
CAPN12-206ENST00000597354 KCNK1O00180 336 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 MATN3O15232 486 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 PLRG1O43660 514 aaKnown RBP16.96■□□□□ 0.31
CAPN12-206ENST00000597354 ITIH2P19823 946 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 ITGB7P26010 798 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 MAT2AP31153 395 aaKnown RBP16.96■□□□□ 0.31
CAPN12-206ENST00000597354 RENBPP51606 427 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 NEK3P51956 506 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 PPP2CBP62714 309 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 PPP2CAP67775 309 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 SF3A2Q15428 464 aaKnown RBP16.96■□□□□ 0.31
CAPN12-206ENST00000597354 SYCP2LQ5T4T6 812 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 KIAA0895LQ68EN5 471 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 TIGD7Q6NT04 549 aaPredicted RBP16.96■□□□□ 0.31
CAPN12-206ENST00000597354 KIAA2013Q8IYS2 634 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 BBS5Q8N3I7 341 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 UBL4BQ8N7F7 174 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 KLK6Q92876 244 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 HDAC11Q96DB2 347 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 LRIG1Q96JA1 1093 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 HDAC8Q9BY41 377 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 CEP41Q9BYV8 373 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 SCUBE2Q9NQ36 999 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 SEMA4GQ9NTN9 838 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 RBM22Q9NW64 420 aaKnown RBP eCLIP16.96■□□□□ 0.31
CAPN12-206ENST00000597354 SEPT10Q9P0V9 454 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 PILRBQ9UKJ0 227 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.96■□□□□ 0.31
CAPN12-206ENST00000597354 PCDHGA5Q9Y5G8 931 aa16.96■□□□□ 0.31
CAPN12-206ENST00000597354 MIF4GDA9UHW6 222 aaKnown RBP16.95■□□□□ 0.3
CAPN12-206ENST00000597354 SLC7A4O43246 635 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 NEBLO76041 1014 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 PCDH8O95206 1070 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 JCHAINP01591 159 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 IGHV4-34P06331 123 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 ADRB3P13945 408 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 CCNB1P14635 433 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 TGM2P21980 687 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 TGM1P22735 817 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 ABL2P42684 1182 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 HNRNPDQ14103 355 aaKnown RBP16.95■□□□□ 0.3
CAPN12-206ENST00000597354 PDK1Q15118 436 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 PPP2R5EQ16537 467 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 WDR45BQ5MNZ6 344 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 CCDC181Q5TID7 509 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 ZC3H18Q86VM9 953 aaKnown RBP16.95■□□□□ 0.3
CAPN12-206ENST00000597354 SYT12Q8IV01 421 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 ZCCHC9Q8N567 271 aaKnown RBP16.95■□□□□ 0.3
CAPN12-206ENST00000597354 TEX26Q8N6G2 289 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 PAF1Q8N7H5 531 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 MAML1Q92585 1016 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 P3H4Q92791 437 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 FAM131CQ96AQ9 280 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 HES6Q96HZ4 224 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 OLFM3Q96PB7 478 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 FAM118BQ9BPY3 351 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 OSBPL1AQ9BXW6 950 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 CPEB1Q9BZB8 566 aaKnown RBP16.95■□□□□ 0.3
CAPN12-206ENST00000597354 OSBPL8Q9BZF1 889 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 SUV39H2Q9H5I1 410 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 EBF2Q9HAK2 575 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 NOD2Q9HC29 1040 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 FSCN3Q9NQT6 498 aa16.95■□□□□ 0.3
CAPN12-206ENST00000597354 GGT7Q9UJ14 662 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms