RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 RPIAP49247 311 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 C1orf61Q13536 156 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 ARL13BQ3SXY8 428 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 ZNF805Q5CZA5 627 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 PRRT3Q5FWE3 981 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 C6orf132Q5T0Z8 1188 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 FAM102AQ5T9C2 384 aaPredicted RBP10.13□□□□□ -0.79
LIG1-209ENST00000596104 MANEALQ5VSG8 457 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 DPY19L2P1Q6NXN4 242 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 FAM131BQ86XD5 332 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 XYLT1Q86Y38 959 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 DRC7Q8IY82 874 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 FAM71AQ8IYT1 594 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 PHACTR4Q8IZ21 702 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 ARL14Q8N4G2 192 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 TMEM35BQ8NCS4 154 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 OR6K2Q8NGY2 324 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 WDR36Q8NI36 951 aaKnown RBP10.13□□□□□ -0.79
LIG1-209ENST00000596104 WDR48Q8TAF3 677 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 BTN2A2Q8WVV5 523 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 C18orf8Q96DM3 657 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 CCDC3Q9BQI4 270 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 ZYG11BQ9C0D3 744 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 CLPBQ9H078 707 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 CLMPQ9H6B4 373 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 ZDHHC6Q9H6R6 413 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 NDFIP2Q9NV92 336 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 HECAQ9UBI9 543 aaPredicted RBP10.13□□□□□ -0.79
LIG1-209ENST00000596104 PPARGC1AQ9UBK2 798 aaKnown RBP10.13□□□□□ -0.79
LIG1-209ENST00000596104 TMEM59LQ9UK28 342 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 DNAJC12Q9UKB3 198 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 SPTA1P02549 2419 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 YY2O15391 372 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 SLC28A2O43868 658 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 CELA2BP08218 269 aaPredicted RBP10.12□□□□□ -0.79
LIG1-209ENST00000596104 ITGA2BP08514 1039 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 TSHRP16473 764 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 ADKP55263 362 aaKnown RBP10.12□□□□□ -0.79
LIG1-209ENST00000596104 YPEL5P62699 121 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 FOXR1Q6PIV2 292 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 MACC1Q6ZN28 852 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 CCDC81Q6ZN84 652 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 B3GNT8Q7Z7M8 397 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 NLRP14Q86W24 1093 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 OR2AP1Q8NGE2 309 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 ARHGEF2Q92974 986 aaKnown RBP10.12□□□□□ -0.79
LIG1-209ENST00000596104 GLMNQ92990 594 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 LIN37Q96GY3 246 aaPredicted RBP10.12□□□□□ -0.79
LIG1-209ENST00000596104 CCNL2Q96S94 520 aaPredicted RBP10.12□□□□□ -0.79
LIG1-209ENST00000596104 MBNL1Q9NR56 388 aaKnown RBP10.12□□□□□ -0.79
LIG1-209ENST00000596104 RWDD2AQ9UIY3 292 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 ATXN7L1Q9ULK2 861 aaPredicted RBP10.12□□□□□ -0.79
LIG1-209ENST00000596104 PADI4Q9UM07 663 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 NEU3Q9UQ49 428 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 HECTD1Q9ULT8 2610 aa10.12□□□□□ -0.79
LIG1-209ENST00000596104 FAM170AA1A519 330 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 KRIT1O00522 736 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 NEMP1O14524 444 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 NOBOXO60393 691 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 WISP1O95388 367 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 GSRP00390 522 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 UGT2B4P06133 528 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 ANXA6P08133 673 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 CYP11B1P15538 503 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 ETFBP38117 255 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 EIF4A3P38919 411 aaKnown RBP10.11□□□□□ -0.79
LIG1-209ENST00000596104 THOP1P52888 689 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 NRG1Q02297 640 aaPredicted RBP10.11□□□□□ -0.79
LIG1-209ENST00000596104 KCNC4Q03721 635 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 SPIDRQ14159 915 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 PTK2BQ14289 1009 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 MYLK3Q32MK0 819 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 ZSCAN23Q3MJ62 389 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 RAB6CQ53S08 254 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 C2CD6Q53TS8 623 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 ARCQ7LC44 396 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 VPS36Q86VN1 386 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 EXD3Q8N9H8 876 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 TP53I13Q8NBR0 393 aaPredicted RBP10.11□□□□□ -0.79
LIG1-209ENST00000596104 ARHGEF26Q96DR7 871 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 CFAP57Q96MR6 1250 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 KLHL32Q96NJ5 620 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 SLC13A1Q9BZW2 595 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 RAB6CQ9H0N0 254 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 RABGEF1Q9UJ41 708 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 ACSL6Q9UKU0 697 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 PCDHGA7Q9Y5G6 932 aa10.11□□□□□ -0.79
LIG1-209ENST00000596104 PIEZO2Q9H5I5 2752 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 GOLGA8SH3BPF8 625 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 TOR1BO14657 336 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 PLD2O14939 933 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 MMP20O60882 483 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 TM7SF2O76062 418 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 POP4O95707 220 aaKnown RBP10.1□□□□□ -0.79
LIG1-209ENST00000596104 RHOQP17081 205 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 ITIH2P19823 946 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 SLC5A2P31639 672 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 ADRA1BP35368 520 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 UGT1A5P35504 534 aa10.1□□□□□ -0.79
LIG1-209ENST00000596104 MAPKAPK2P49137 400 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms