RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 MED10Q9BTT4 135 aa17.57■□□□□ 0.4
ARHGEF1-213ENST00000595897 KLK14Q9P0G3 267 aa17.57■□□□□ 0.4
ARHGEF1-213ENST00000595897 CITO14578 2027 aa17.57■□□□□ 0.4
ARHGEF1-213ENST00000595897 ZNF839A8K0R7 811 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 MRASO14807 208 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 HTRA2O43464 458 aaPredicted RBP17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 HUS1O60921 280 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 MT-CO1P00395 513 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 TKTL1P51854 596 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 PPP1R3AQ16821 1122 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 ACBD5Q5T8D3 534 aaPredicted RBP17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 LINC01465Q8N7H1 131 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 B3GALNT2Q8NCR0 500 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 TEKT5Q96M29 485 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 KIFC1Q9BW19 673 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 DUSP16Q9BY84 665 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 RECQL4O94761 1208 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 STT3AP46977 705 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 ALDH3B2P48448 385 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 PLOD1Q02809 727 aaPredicted RBP17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 SULT2A1Q06520 285 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 LRP8Q14114 963 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 CSHL1Q14406 222 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 SQLEQ14534 574 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 ZBTB6Q15916 424 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 SLC27A1Q6PCB7 646 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 RPS27LQ71UM5 84 aaKnown RBP17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 GPR141Q7Z602 305 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 LINC00523Q86TU6 105 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 DHFR2Q86XF0 187 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 CLVS1Q8IUQ0 354 aaPredicted RBP17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 PELI3Q8N2H9 469 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 RIN3Q8TB24 985 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 HEXDCQ8WVB3 486 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 SLCO4A1Q96BD0 722 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 MRPL57Q9BQC6 102 aaKnown RBP17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 DNAJC5Q9H3Z4 198 aa17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 NXF3Q9H4D5 531 aaKnown RBP17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 CNOT6Q9ULM6 557 aaKnown RBP17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 UBQLN1Q9UMX0 589 aaKnown RBP17.56■□□□□ 0.4
ARHGEF1-213ENST00000595897 AP3B1O00203 1094 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 FBP2O00757 339 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 SNRPB2P08579 225 aaKnown RBP17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 HSPA8P11142 646 aaKnown RBP17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 NPR3P17342 541 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 RPL10P27635 214 aaKnown RBP17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 GRIA3P42263 894 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 CSRP3P50461 194 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 PLK1P53350 603 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 ARMCX2Q7L311 632 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 ZNF786Q8N393 782 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 IPMKQ8NFU5 416 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 SPATA22Q8NHS9 363 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 HDAC11Q96DB2 347 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 GPR78Q96P69 363 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 VAT1Q99536 393 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 SLC39A3Q9BRY0 314 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 CDHR5Q9HBB8 845 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 GOLGA2P5Q9HBQ8 144 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 DDIT4Q9NX09 232 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 CROTQ9UKG9 612 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 AURKCQ9UQB9 309 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 RAD54BQ9Y620 910 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 PLOD2O00469 737 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 SRP72O76094 671 aaKnown RBP17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 SLC25A27O95847 323 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 IMPDH2P12268 514 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 NCAM1P13591 858 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 ATP5F1P24539 256 aaPredicted RBP17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 KPNA2P52292 529 aaKnown RBP17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 RABGGTBP53611 331 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 TAS2R39P59534 338 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 TRAP1Q12931 704 aaKnown RBP17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 DALRD3Q5D0E6 543 aaKnown RBP17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 SAMD4BQ5PRF9 694 aaKnown RBP17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 MAMDC4Q6UXC1 1216 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 DCUN1D5Q9BTE7 237 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 BRD8Q9H0E9 1235 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 FAM49AQ9H0Q0 323 aaPredicted RBP17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 MRGBPQ9NV56 204 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 SLC8A2Q9UPR5 921 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 SAC3D1A6NKF1 404 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 TRIM24O15164 1050 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 SLC7A2P52569 658 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 MAP3K7CLP57077 242 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 C1QTNF8P60827 252 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 TUBA4AP68366 448 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 C16orf72Q14CZ0 275 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 ARL13BQ3SXY8 428 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 PITRM1Q5JRX3 1037 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 PCID2Q5JVF3 399 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 ESRP1Q6NXG1 681 aaKnown RBP17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 PKN3Q6P5Z2 889 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 CHSY3Q70JA7 882 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 MFSD6LQ8IWD5 586 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 FIBCD1Q8N539 461 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 TRPM4Q8TD43 1214 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 CANT1Q8WVQ1 401 aa17.55■□□□□ 0.4
ARHGEF1-213ENST00000595897 ZNF560Q96MR9 790 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms