RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 FOXJ1Q92949 421 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 FAM131CQ96AQ9 280 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 VOPP1Q96AW1 172 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 HAUS1Q96CS2 278 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 ZNF419Q96HQ0 510 aaPredicted RBP14.54□□□□□ -0.08
LIG1-208ENST00000595758 KLHL32Q96NJ5 620 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 TUBGCP5Q96RT8 1024 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 PCED1AQ9H1Q7 454 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 HAUS2Q9NVX0 235 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 GMEB2Q9UKD1 530 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 PLXND1Q9Y4D7 1925 aa14.54□□□□□ -0.08
LIG1-208ENST00000595758 GON4LQ3T8J9 2241 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 NUMA1Q14980 2115 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 FAM47DPA6NHR8 397 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 C16orf96A6NNT2 1141 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 APOC4-APOC2K7ER74 178 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 KCNK1O00180 336 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 GJB3O75712 270 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 APOC2P02655 101 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 RETP07949 1114 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 PLA2G5P39877 138 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 NEK3P51956 506 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 ADPRHP54922 357 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 AP1S1P61966 158 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 IFI35P80217 286 aaPredicted RBP14.53□□□□□ -0.08
LIG1-208ENST00000595758 ITKQ08881 620 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 PIP5KL1Q5T9C9 394 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 AGBL4Q5VU57 503 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 LYSMD4Q5XG99 296 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 FBXL19Q6PCT2 694 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 NCEH1Q6PIU2 408 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 B4GALNT4Q76KP1 1039 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 SLC41A1Q8IVJ1 513 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 OR2T34Q8NGX1 318 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 TFB1MQ8WVM0 346 aaKnown RBP14.53□□□□□ -0.08
LIG1-208ENST00000595758 HSPA12BQ96MM6 686 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 ZNF641Q96N77 438 aaPredicted RBP14.53□□□□□ -0.08
LIG1-208ENST00000595758 NUDCD1Q96RS6 583 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 MGME1Q9BQP7 344 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 SUV39H2Q9H5I1 410 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 C6orf106Q9H6K1 298 aaPredicted RBP14.53□□□□□ -0.08
LIG1-208ENST00000595758 ATP13A3Q9H7F0 1226 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 SCUBE2Q9NQ36 999 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 NCDNQ9UBB6 729 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 AMACRQ9UHK6 382 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 PYCARDQ9ULZ3 195 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 RIF1Q5UIP0 2472 aaKnown RBP14.53□□□□□ -0.08
LIG1-208ENST00000595758 THADAQ6YHU6 1953 aa14.53□□□□□ -0.08
LIG1-208ENST00000595758 EP300Q09472 2414 aaPredicted RBP14.52□□□□□ -0.08
LIG1-208ENST00000595758 TBC1D3DA0A087WVF3 549 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 TBC1D3IA0A087WXS9 549 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 TBC1D3EA0A087X179 549 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 TBC1D3KA0A087X1G2 549 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.52□□□□□ -0.09
LIG1-208ENST00000595758 TTC24A2A3L6 582 aaPredicted RBP14.52□□□□□ -0.09
LIG1-208ENST00000595758 GOLGA6L9A6NEM1 432 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 TBC1D3FA6NER0 549 aaPredicted RBP14.52□□□□□ -0.09
LIG1-208ENST00000595758 METTL12A8MUP2 240 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 TBC1D3LB9A6J9 549 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 PLRG1O43660 514 aaKnown RBP14.52□□□□□ -0.09
LIG1-208ENST00000595758 KIF5CO60282 957 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 EPN2O95208 641 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 PIGNO95427 931 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 TBC1D3HP0C7X1 549 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 CR2P20023 1033 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 SERPINA4P29622 427 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 MAXP61244 160 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 CREB5Q02930 508 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 BCL2L1Q07817 233 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 XRCC4Q13426 336 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 PRKD1Q15139 912 aaPredicted RBP14.52□□□□□ -0.09
LIG1-208ENST00000595758 RALGPS1Q5JS13 557 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 SYCP2LQ5T4T6 812 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 SEL1L2Q5TEA6 688 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 TBC1D3GQ6DHY5 549 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 TBC1D3CQ6IPX1 549 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 PARS2Q7L3T8 475 aaKnown RBP14.52□□□□□ -0.09
LIG1-208ENST00000595758 CYP2U1Q7Z449 544 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 ZC3H18Q86VM9 953 aaKnown RBP14.52□□□□□ -0.09
LIG1-208ENST00000595758 CAMK1DQ8IU85 385 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 TBC1D3Q8IZP1 549 aaPredicted RBP14.52□□□□□ -0.09
LIG1-208ENST00000595758 ACTL9Q8TC94 416 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 HCAR2Q8TDS4 363 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 RUBCNQ92622 972 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 IL12RB2Q99665 862 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 SEMA3CQ99985 751 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 TLR10Q9BXR5 811 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 POLR1EQ9GZS1 481 aaKnown RBP14.52□□□□□ -0.09
LIG1-208ENST00000595758 KDM4CQ9H3R0 1056 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 NOD2Q9HC29 1040 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 SEPT10Q9P0V9 454 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 DKK3Q9UBP4 350 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 TTLL3Q9Y4R7 772 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 PCDHGA5Q9Y5G8 931 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 SHROOM3Q8TF72 1996 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 OTOGLQ3ZCN5 2332 aa14.52□□□□□ -0.09
LIG1-208ENST00000595758 BCLAF3A2AJT9 711 aaKnown RBP14.51□□□□□ -0.09
LIG1-208ENST00000595758 MEI4A8MW99 385 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 HACD1B0YJ81 288 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 H7C0C1 242 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms