RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 CHD5Q8TDI0 1954 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 H3BRJ5 948 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 J3KR12 359 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 DFFAO00273 331 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 PRAMEF11O60813 436 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 CYP1A2P05177 515 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 TPM1P09493 284 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 THEGLP0DJG4 465 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 HNRNPH3P31942 346 aaKnown RBP15.48■□□□□ 0.07
TRIM28-203ENST00000593582 RXRGP48443 463 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 PAPOLAP51003 745 aaKnown RBP15.48■□□□□ 0.07
TRIM28-203ENST00000593582 TRIM14Q14142 442 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 CYTH1Q15438 398 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 SHBQ15464 509 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 DPYSL2Q16555 572 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 SMTNL2Q2TAL5 461 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 RAB44Q7Z6P3 723 aaPredicted RBP15.48■□□□□ 0.07
TRIM28-203ENST00000593582 TTC7BQ86TV6 843 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 SPATS2Q86XZ4 545 aaKnown RBP15.48■□□□□ 0.07
TRIM28-203ENST00000593582 GATAD2AQ86YP4 633 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 CHCHD4Q8N4Q1 142 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 LZTR1Q8N653 840 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 NIPA2Q8N8Q9 360 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 PNPLA1Q8N8W4 532 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 NETO2Q8NC67 525 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 FAM174AQ8TBP5 190 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 SAP25Q8TEE9 199 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 ADAMTS14Q8WXS8 1223 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 HSPH1Q92598 858 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 PDFQ9HBH1 243 aa15.48■□□□□ 0.07
TRIM28-203ENST00000593582 CWC15Q9P013 229 aaKnown RBP15.48■□□□□ 0.07
TRIM28-203ENST00000593582 MYO1FO00160 1098 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 TNFSF14O43557 240 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 PALMO75781 387 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 PAK4O96013 591 aaPredicted RBP15.47■□□□□ 0.07
TRIM28-203ENST00000593582 IL1R2P27930 398 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 EPHA8P29322 1005 aaPredicted RBP15.47■□□□□ 0.07
TRIM28-203ENST00000593582 ARL4AP40617 200 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 SGCGQ13326 291 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 DPYSQ14117 519 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 GRM3Q14832 879 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 TSR1Q2NL82 804 aaKnown RBP15.47■□□□□ 0.07
TRIM28-203ENST00000593582 AFMIDQ63HM1 303 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 SLCO6A1Q86UG4 719 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 RNF214Q8ND24 703 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 OR8K1Q8NGG5 319 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 VOPP1Q96AW1 172 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 EXOC2Q96KP1 924 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 CPEB1Q9BZB8 566 aaKnown RBP15.47■□□□□ 0.07
TRIM28-203ENST00000593582 SP110Q9HB58 689 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.47■□□□□ 0.07
TRIM28-203ENST00000593582 ZNHIT6Q9NWK9 470 aaKnown RBP15.47■□□□□ 0.07
TRIM28-203ENST00000593582 DKK3Q9UBP4 350 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 LHX3Q9UBR4 397 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 FTSJ1Q9UET6 329 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 KLK13Q9UKR3 277 aa15.47■□□□□ 0.07
TRIM28-203ENST00000593582 CABIN1Q9Y6J0 2220 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 IGLON5A6NGN9 336 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 GOLGA8CPA6NN73 597 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 A6NNZ2 444 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 ATXN1LP0C7T5 689 aaKnown RBP15.46■□□□□ 0.07
TRIM28-203ENST00000593582 TCF4P15884 667 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 EIF4A3P38919 411 aaKnown RBP15.46■□□□□ 0.07
TRIM28-203ENST00000593582 ABL2P42684 1182 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 CLDN2P57739 230 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 UNQ6494/PRO21346Q6UXR6 183 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 POLNQ7Z5Q5 900 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 ARHGAP12Q8IWW6 846 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 NPWQ8N729 165 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 TEKT4Q8WW24 435 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 BTBD6Q96KE9 485 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 DNAJC7Q99615 494 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 CALN1Q9BXU9 219 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 DEF6Q9H4E7 631 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 ITM2BQ9Y287 266 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 MSRB2Q9Y3D2 182 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 HS3ST3A1Q9Y663 406 aa15.46■□□□□ 0.07
TRIM28-203ENST00000593582 TMEM131Q92545 1883 aa15.46■□□□□ 0.06
TRIM28-203ENST00000593582 AREL1O15033 823 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 INSIG1O15503 277 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 RARAP10276 462 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 XPAP23025 273 aaPredicted RBP15.45■□□□□ 0.06
TRIM28-203ENST00000593582 SSR1P43307 286 aaKnown RBP15.45■□□□□ 0.06
TRIM28-203ENST00000593582 SUOXP51687 545 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 IL10RBQ08334 325 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 BNIP3Q12983 259 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 FGL2Q14314 439 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 RFTN1Q14699 578 aaPredicted RBP15.45■□□□□ 0.06
TRIM28-203ENST00000593582 SLC18A3Q16572 532 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 ST3GAL2Q16842 350 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 LRRC73Q5JTD7 316 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 CFAP58Q5T655 872 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 TMCO3Q6UWJ1 677 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 GCNT7Q6ZNI0 430 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 Q6ZSR6 202 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 PTAR1Q7Z6K3 402 aaPredicted RBP15.45■□□□□ 0.06
TRIM28-203ENST00000593582 ABI3BPQ7Z7G0 1075 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 DCP2Q8IU60 420 aaKnown RBP15.45■□□□□ 0.06
TRIM28-203ENST00000593582 VSTM4Q8IW00 320 aa15.45■□□□□ 0.06
TRIM28-203ENST00000593582 EID2Q8N6I1 236 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms