RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 RAB7BQ96AH8 199 aa13.28□□□□□ -0.28
PRKCSH-218ENST00000593053 ZNF653Q96CK0 615 aa13.28□□□□□ -0.28
PRKCSH-218ENST00000593053 CELF6Q96J87 481 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-218ENST00000593053 BMFQ96LC9 184 aa13.28□□□□□ -0.28
PRKCSH-218ENST00000593053 PEBP4Q96S96 227 aa13.28□□□□□ -0.28
PRKCSH-218ENST00000593053 SNRNP25Q9BV90 132 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-218ENST00000593053 CAAP1Q9H8G2 361 aa13.28□□□□□ -0.28
PRKCSH-218ENST00000593053 GGT7Q9UJ14 662 aa13.28□□□□□ -0.28
PRKCSH-218ENST00000593053 PCDHGA1Q9Y5H4 931 aa13.28□□□□□ -0.28
PRKCSH-218ENST00000593053 POM121BA6NF01 834 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 SPINT1O43278 529 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 DAPK3O43293 454 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 PRPSAP2O60256 369 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 RNF8O76064 485 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 CAPNS1P04632 268 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 DGKAP23743 735 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 MIPP30301 263 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 ACADVLP49748 655 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 CLDN6P56747 220 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 FANCCQ00597 558 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 RAD51Q06609 339 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 CYTH1Q15438 398 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 KLHL40Q2TBA0 621 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 FIGNQ5HY92 759 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 ERMARDQ5T6L9 678 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 KYAT3Q6YP21 454 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 TTC7BQ86TV6 843 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 ZSCAN30Q86W11 494 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 SLC25A45Q8N413 288 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 FNIP1Q8TF40 1166 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 TSC1Q92574 1164 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 ARHGEF26Q96DR7 871 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 EXOC2Q96KP1 924 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 KCTD15Q96SI1 283 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 C1QTNF2Q9BXJ5 285 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 CCDC86Q9H6F5 360 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 LRRC19Q9H756 370 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 UCKL1Q9NWZ5 548 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 DONSONQ9NYP3 566 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 MYO1AQ9UBC5 1043 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 LHX3Q9UBR4 397 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 UBA2Q9UBT2 640 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 HS3ST3A1Q9Y663 406 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 SCINQ9Y6U3 715 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 DOCK4Q8N1I0 1966 aa13.27□□□□□ -0.29
PRKCSH-218ENST00000593053 EIF3CLB5ME19 914 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 J3KR12 359 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 TAF4O00268 1085 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 TRIM38O00635 465 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 FPGTO14772 594 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 AREL1O15033 823 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 INSIG1O15503 277 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 FFAR2O15552 330 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 SIGLEC6O43699 453 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 PIAS2O75928 621 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 C1SP09871 688 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 CKMT2P17540 419 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 PAPOLAP51003 745 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 NDST2P52849 883 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 TDRD12Q587J7 1177 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 ZNF542PQ5EBM4 170 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 PPP6R3Q5H9R7 873 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 KDM7AQ6ZMT4 941 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 RFX8Q6ZV50 586 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 CYP4V2Q6ZWL3 525 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 TMPRSS12Q86WS5 348 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 PROSER1Q86XN7 944 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 FAM174AQ8TBP5 190 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 MDM1Q8TC05 714 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 TRIM11Q96F44 468 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 KLF6Q99612 283 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 EIF3CQ99613 913 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 NCAPGQ9BPX3 1015 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 SLC39A8Q9C0K1 460 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 PDFQ9HBH1 243 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 DNAJC28Q9NX36 388 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 MFHAS1Q9Y4C4 1052 aa13.26□□□□□ -0.29
PRKCSH-218ENST00000593053 DMXL2Q8TDJ6 3036 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 TRABD2BA6NFA1 517 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 ARHGAP42A6NI28 874 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 PRAMEF11O60813 436 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 MMP20O60882 483 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 LRCH4O75427 683 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 PIGNO95427 931 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 MYBL1P10243 752 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 CDK4P11802 303 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 TIMP2P16035 220 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 ERCC2P18074 760 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 ITIH2P19823 946 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 PBX1P40424 430 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 RABIFP47224 123 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 UBASH3AP57075 661 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 PDE1CQ14123 709 aaPredicted RBP13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 PROX2Q3B8N5 592 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 HGSNATQ68CP4 663 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 DCP2Q8IU60 420 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 CXorf40AQ8TE69 158 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 CPLX3Q8WVH0 158 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 ASB12Q8WXK4 309 aa13.25□□□□□ -0.29
PRKCSH-218ENST00000593053 IFT43Q96FT9 208 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms