RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 MRPL46Q9H2W6 279 aaKnown RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 MRM3Q9HC36 420 aaKnown RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 RSL24D1Q9UHA3 163 aaKnown RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 IPO11Q9UI26 975 aaKnown RBP15.03■□□□□ -0
SMARCA4-219ENST00000592604 FBXW11Q9UKB1 542 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 SQORQ9Y6N5 450 aa15.03■□□□□ -0
SMARCA4-219ENST00000592604 ARHGEF37A1IGU5 675 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 ASB14A6NK59 587 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 H3BNH8 94 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 CACNG3O60359 315 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 PNPLA4P41247 253 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 CDK9P50750 372 aaKnown RBP15.02■□□□□ -0
SMARCA4-219ENST00000592604 IRAK1BP1Q5VVH5 260 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 OLFML2BQ68BL8 750 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 PAQR9Q6ZVX9 377 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 CEP97Q8IW35 865 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 PCDH20Q8N6Y1 951 aaKnown RBP15.02■□□□□ -0
SMARCA4-219ENST00000592604 CCNYL1Q8N7R7 359 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 PPTC7Q8NI37 304 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 RIN3Q8TB24 985 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 DIS3LQ8TF46 1054 aaKnown RBP15.02■□□□□ -0
SMARCA4-219ENST00000592604 LRTOMTQ8WZ04 291 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 SLCO4A1Q96BD0 722 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 CCT7Q99832 543 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 MRPL57Q9BQC6 102 aaKnown RBP15.02■□□□□ -0
SMARCA4-219ENST00000592604 CD300AQ9UGN4 299 aa15.02■□□□□ -0
SMARCA4-219ENST00000592604 A0A0J9YVX5 310 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 STMN1P16949 149 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 SLC7A1P30825 629 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 GJA9P57773 515 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 PRPSAP1Q14558 356 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 PCID2Q5JVF3 399 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 PKN3Q6P5Z2 889 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 OSTM1Q86WC4 334 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 MFSD6LQ8IWD5 586 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 TRIML2Q8N7C3 387 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 C17orf50Q8WW18 174 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 GFM2Q969S9 779 aaKnown RBP15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 FAR2Q96K12 515 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 PCDHAC1Q9H158 963 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 OLAHQ9NV23 265 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 RNF19AQ9NV58 838 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 CACNA2D2Q9NY47 1150 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 TANC1Q9C0D5 1861 aa15.02□□□□□ -0.01
SMARCA4-219ENST00000592604 FAM155AB1AL88 458 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 RECQL4O94761 1208 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 ZNF286BP0CG31 522 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 TAF6P49848 677 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 TUBA4AP68366 448 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 PDAP1Q13442 181 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 SQLEQ14534 574 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 CYTH1Q15438 398 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 DGKDQ16760 1214 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 TAPT1Q6NXT6 567 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 CNSTQ6PJW8 725 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 SIX6OS1Q8N1H7 587 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 TXNDC5Q8NBS9 432 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 LPGAT1Q92604 370 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 OMDQ99983 421 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 SEMA6AQ9H2E6 1030 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 ADAMTS10Q9H324 1103 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 PNPLA3Q9NST1 481 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 SMIM28A0A1B0GU29 152 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 FAM95CA0A1B0GW59 222 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 HEATR9A2RTY3 570 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 FBP2O00757 339 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 JCHAINP01591 159 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 WARSP23381 471 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 ATP5F1P24539 256 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 SULT2A1Q06520 285 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 TRIM67Q6ZTA4 783 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 CLEC20AQ6ZU45 233 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 TRPC4APQ8TEL6 797 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 PGAP3Q96FM1 320 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 SLC29A1Q99808 456 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 UBP1Q9NZI7 540 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 MYRFQ9Y2G1 1151 aa15.01□□□□□ -0.01
SMARCA4-219ENST00000592604 PRORSD1PA6NEY8 169 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 H3BRB1 525 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 CLDN5O00501 218 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 NRP1O14786 923 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 ARCN1P48444 511 aaKnown RBP15□□□□□ -0.01
SMARCA4-219ENST00000592604 TKTL1P51854 596 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 ZNF135P52742 658 aaPredicted RBP15□□□□□ -0.01
SMARCA4-219ENST00000592604 ZNF460Q14592 562 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 GRIK4Q16099 956 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 NOTUMQ6P988 496 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 ARMCX2Q7L311 632 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 CATSPER4Q7RTX7 472 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 HERC6Q8IVU3 1022 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 EMID1Q96A84 441 aaPredicted RBP15□□□□□ -0.01
SMARCA4-219ENST00000592604 OSBPL2Q9H1P3 480 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 NXF3Q9H4D5 531 aaKnown RBP15□□□□□ -0.01
SMARCA4-219ENST00000592604 TUT1Q9H6E5 874 aaKnown RBP15□□□□□ -0.01
SMARCA4-219ENST00000592604 MEAF6Q9HAF1 191 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 A0A087X1B8 175 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 HUS1O60921 280 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 MPP1Q00013 466 aa15□□□□□ -0.01
SMARCA4-219ENST00000592604 PPIL2Q13356 520 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms