RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 C16orf72Q14CZ0 275 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 PARP6Q2NL67 630 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 TMC5Q6UXY8 1006 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 ZDHHC13Q8IUH4 622 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 FNDC5Q8NAU1 212 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 OR5B17Q8NGF7 314 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 CDRT15Q96T59 188 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 MID1IP1Q9NPA3 183 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 QSOX1O00391 747 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 UNC5CO95185 931 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 ERBB2P04626 1255 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 GSTM1P09488 218 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 COX10Q12887 443 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 DPYSL3Q14195 570 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 RAB30Q15771 203 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 RAET1GQ6H3X3 334 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 B3GNT6Q6ZMB0 384 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 DBF4BQ8NFT6 615 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 TMEM237Q96Q45 408 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 SEPHS2Q99611 448 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 CLEC4MQ9H2X3 399 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 CFAP97Q9P2B7 532 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 ASTN1O14525 1302 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 C1orf232A0A0U1RR37 186 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 CCNT2O60583 730 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 RECQL5O94762 991 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 HSMCR30P0CW71 290 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 KELP23276 732 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 IFNGR2P38484 337 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 TRAF3Q13114 568 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 GSTA3Q16772 222 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 FOXR2Q6PJQ5 311 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 ARCQ7LC44 396 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 PACS2Q86VP3 889 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 SLC44A2Q8IWA5 706 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 WDR36Q8NI36 951 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 ACMSDQ8TDX5 336 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 ARHGAP28Q9P2N2 729 aa13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 TNPO3Q9Y5L0 923 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-216ENST00000591545 RGS14O43566 566 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 CCL5P13501 91 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 ADRA1DP25100 572 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 BRMS1LQ5PSV4 323 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 ARMC3Q5W041 872 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 STK32CQ86UX6 486 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 TSEN2Q8NCE0 465 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 TM6SF2Q9BZW4 377 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 SPRTNQ9H040 489 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 A8MX80 341 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 ARVCFO00192 962 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 CCL16O15467 120 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 NDUFB5O43674 189 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 B4GALT4O60513 344 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 NUDT17P0C025 328 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 MRPS5P82675 430 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 TYW3Q6IPR3 259 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 SPPL2AQ8TCT8 520 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 UTP15Q8TED0 518 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 PHACTR1Q9C0D0 580 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 ROGDIQ9GZN7 287 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 ANAPC2Q9UJX6 822 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 VAV3Q9UKW4 847 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 CBX6O95503 412 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 CYP3A5P20815 502 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 CES1P23141 567 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 EVX2Q03828 476 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 SH3D19Q5HYK7 790 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 ZNF470Q6ECI4 717 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 CDC73Q6P1J9 531 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 ADHFE1Q8IWW8 467 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 ITFG1Q8TB96 612 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 EPS8L1Q8TE68 723 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 ZNF483Q8TF39 744 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 FNIP1Q8TF40 1166 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 TMEM216Q9P0N5 145 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 MAP10Q9P2G4 905 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 LIMD1Q9UGP4 676 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 ABCC6O95255 1503 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 SMIM31A0A1B0GVY4 71 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 VAPBO95292 243 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 PTPN2P17706 415 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 TYMPP19971 482 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 CHN2P52757 468 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 MPPE1Q53F39 396 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 TTMPQ5BVD1 217 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 TTC23Q5W5X9 447 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 C11orf74Q86VG3 221 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 LENG1Q96BZ8 264 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 PHF21BQ96EK2 531 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 RNF145Q96MT1 663 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 TCF25Q9BQ70 676 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 HPS4Q9NQG7 708 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 RGPD1P0DJD0 1748 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 A0A0B4J269 797 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 TMEM191CA6NGB0 347 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 KPNA5O15131 536 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 DCXO43602 365 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 CYP1A2P05177 515 aa13.43□□□□□ -0.26
SMARCA4-216ENST00000591545 MARSP56192 900 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms