RNA–Protein interactions for RNA: ENST00000590749.2

ARID3A-206, Transcript of AT-rich interaction domain 3A, human

TSL 2

Gene ARID3A, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID3A-206	ENST00000590749	CDK18	Q07002	472 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	MAP7	Q14244	749 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	HLTF	Q14527	1009 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	MSANTD2	Q6P1R3	559 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	OGFOD3	Q6PK18	319 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	BHLHA9	Q7RTU4	235 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	HPS6	Q86YV9	775 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	IQCK	Q8N0W5	287 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	SH2D3C	Q8N5H7	860 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	FAM46D	Q8NEK8	389 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	OR4D9	Q8NGE8	314 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	GRIN3A	Q8TCU5	1115 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	TAF4B	Q92750	862 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	PNPLA2	Q96AD5	504 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	SNRNP40	Q96DI7	357 aa	Known RBP	12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	C19orf60	Q96EN9	201 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	C1QTNF7	Q9BXJ2	289 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	FGFBP2	Q9BYJ0	223 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	ZMYND15	Q9H091	742 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	COPG2	Q9UBF2	871 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	IL36A	Q9UHA7	158 aa		12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	G3BP2	Q9UN86	482 aa	Known RBP	12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	DIDO1	Q9BTC0	2240 aa	Known RBP	12.84	□□□□□ -0.35
ARID3A-206	ENST00000590749	TMEM110-MUSTN1	A8MSY1	372 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	RHPN2P1	A8MT19	583 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	LRRTM2	O43300	516 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	TSPAN6	O43657	245 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	ZG16	O60844	167 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	KATNA1	O75449	491 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	CYP2J2	P51589	502 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	OR1D5	P58170	312 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	SRSF11	Q05519	484 aa	Known RBP	12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	BIRC2	Q13490	618 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	CHRNA6	Q15825	494 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	ARSI	Q5FYB1	569 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	SLC6A19	Q695T7	634 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	TMEM135	Q86UB9	458 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	VPS36	Q86VN1	386 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	CHSY1	Q86X52	802 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	FAM184A	Q8NB25	1140 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	GLIS1	Q8NBF1	620 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	XXYLT1	Q8NBI6	393 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	OR2A12	Q8NGT7	310 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	ATL2	Q8NHH9	583 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	TSACC	Q96A04	125 aa	Predicted RBP	12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	CTRC	Q99895	268 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	DPYSL5	Q9BPU6	564 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	TRIM55	Q9BYV6	548 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	ACSS2	Q9NR19	701 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	ASF1B	Q9NVP2	202 aa		12.83	□□□□□ -0.36
ARID3A-206	ENST00000590749	YJEFN3	A6XGL0	299 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749		E7ENQ6	273 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	B4GAT1	O43505	415 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	EIF5B	O60841	1220 aa	Known RBP	12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	MOCS2	O96007	188 aa	Predicted RBP	12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	RPN1	P04843	607 aa	Known RBP	12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	SNRPB2	P08579	225 aa	Known RBP	12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	THRA	P10827	490 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	SSTR2	P30874	369 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	ITGA1	P56199	1179 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	NNT	Q13423	1086 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	ALG11	Q2TAA5	492 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	PAPD7	Q5XG87	772 aa	Known RBP	12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	TAF8	Q7Z7C8	310 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	RHOT1	Q8IXI2	618 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	SIX6OS1	Q8N1H7	587 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	ATP11C	Q8NB49	1132 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	KIAA1524	Q8TCG1	905 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	CENPT	Q96BT3	561 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	DNAJC19	Q96DA6	116 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	DPEP2	Q9H4A9	486 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	MLXIPL	Q9NP71	852 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	CHST11	Q9NPF2	352 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	STK17A	Q9UEE5	414 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	KL	Q9UEF7	1012 aa		12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	KLF2	Q9Y5W3	355 aa	Predicted RBP	12.82	□□□□□ -0.36
ARID3A-206	ENST00000590749	PRRC2C	Q9Y520	2896 aa	Known RBP	12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	PIPSL	A2A3N6	862 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749		F5H5T6	163 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	LEFTY1	O75610	366 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	VNN1	O95497	513 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	DLGAP3	O95886	979 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	TNF	P01375	233 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	SRC	P12931	536 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	CD58	P19256	250 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	F8A1	P23610	371 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	NFKBIA	P25963	317 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	PEX5	P50542	639 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	SRP54	P61011	504 aa	Known RBP	12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	ADIG	Q0VDE8	80 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	ART3	Q13508	389 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	TTC39B	Q5VTQ0	682 aa	Predicted RBP	12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	RAP1GAP2	Q684P5	730 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	ENPP7	Q6UWV6	458 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	SV2B	Q7L1I2	683 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	CCAR2	Q8N163	923 aa	Known RBP	12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	NXPE1	Q8N323	547 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	BMPER	Q8N8U9	685 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	RANBP9	Q96S59	729 aa		12.81	□□□□□ -0.36
ARID3A-206	ENST00000590749	RBM15	Q96T37	977 aa	Known RBP eCLIP	12.81	□□□□□ -0.36	5e-7	■■□□□ 12.5

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms