RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 IL9RQ01113 521 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 FOXC1Q12948 553 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 SGCGQ13326 291 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 DPYSQ14117 519 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 TRIP6Q15654 476 aaKnown RBP12.25□□□□□ -0.45
TPM4-212ENST00000590180 DPYSL2Q16555 572 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 ZNF423Q2M1K9 1284 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 ZNF284Q2VY69 593 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 ATP13A4Q4VNC1 1196 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 ZFYVE27Q5T4F4 411 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 SEL1L3Q68CR1 1132 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 TMCO3Q6UWJ1 677 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 ARHGAP36Q6ZRI8 547 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 CNGA4Q8IV77 575 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 NAXDQ8IW45 347 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 ARHGAP12Q8IWW6 846 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 PAF1Q8N7H5 531 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 NIPA2Q8N8Q9 360 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 TEKT4Q8WW24 435 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 CSPG4P5Q96PW8 444 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 ELF4Q99607 663 aaPredicted RBP12.25□□□□□ -0.45
TPM4-212ENST00000590180 OSBPL1AQ9BXW6 950 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 SLC17A9Q9BYT1 436 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 RBSNQ9H1K0 784 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 PCDH18Q9HCL0 1135 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 SPTLC3Q9NUV7 552 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 IPO11Q9UI26 975 aaKnown RBP12.25□□□□□ -0.45
TPM4-212ENST00000590180 ZFR2Q9UPR6 939 aaKnown RBP12.25□□□□□ -0.45
TPM4-212ENST00000590180 MFHAS1Q9Y4C4 1052 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 PCDHGB2Q9Y5G2 931 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 FADS3Q9Y5Q0 445 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 DOCK9Q9BZ29 2069 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 TSPAN6O43657 245 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 TMEM253P0C7T8 217 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 TIMP2P16035 220 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 CCT8P50990 548 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 SLC25A11Q02978 314 aaKnown RBP12.24□□□□□ -0.45
TPM4-212ENST00000590180 IL10RBQ08334 325 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 TBX2Q13207 712 aaPredicted RBP12.24□□□□□ -0.45
TPM4-212ENST00000590180 MESDQ14696 234 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 AFMIDQ63HM1 303 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 SARM1Q6SZW1 724 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 SRLQ86TD4 932 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 CPNE8Q86YQ8 564 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 TP53INP2Q8IXH6 220 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 NPWQ8N729 165 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 KCTD6Q8NC69 237 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 SLC35G2Q8TBE7 412 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 RAB7BQ96AH8 199 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 CINPQ9BW66 212 aaPredicted RBP12.24□□□□□ -0.45
TPM4-212ENST00000590180 CPEB1Q9BZB8 566 aaKnown RBP12.24□□□□□ -0.45
TPM4-212ENST00000590180 SUV39H2Q9H5I1 410 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 PDFQ9HBH1 243 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 FZD3Q9NPG1 666 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 ETNK2Q9NVF9 386 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 LHX3Q9UBR4 397 aa12.24□□□□□ -0.45
TPM4-212ENST00000590180 TRPM6Q9BX84 2022 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 CHD5Q8TDI0 1954 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 LAMA1P25391 3075 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 A0A1B0GTQ1 180 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 IGLON5A6NGN9 336 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 FLRT2O43155 660 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 AP1G1O43747 822 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 PIGNO95427 931 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 ITGAVP06756 1048 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 THEGLP0DJG4 465 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 ITIH2P19823 946 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 HNRNPA2B1P22626 353 aaKnown RBP12.23□□□□□ -0.45
TPM4-212ENST00000590180 ABL2P42684 1182 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 ARRB1P49407 418 aaPredicted RBP12.23□□□□□ -0.45
TPM4-212ENST00000590180 SCNN1BP51168 640 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 CLDN2P57739 230 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 NXPH1P58417 271 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 OVGP1Q12889 678 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 MMRN1Q13201 1228 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 RFTN1Q14699 578 aaPredicted RBP12.23□□□□□ -0.45
TPM4-212ENST00000590180 LRRC73Q5JTD7 316 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 CFAP58Q5T655 872 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 KIAA1161Q6NSJ0 714 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 DBX2Q6ZNG2 339 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 IQCHQ86VS3 1027 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 SPATS2Q86XZ4 545 aaKnown RBP12.23□□□□□ -0.45
TPM4-212ENST00000590180 GATAD2AQ86YP4 633 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 CAMK1DQ8IU85 385 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 MAP7D3Q8IWC1 876 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 TSEN2Q8NCE0 465 aaKnown RBP12.23□□□□□ -0.45
TPM4-212ENST00000590180 NSMCE1Q8WV22 266 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 CALN1Q9BXU9 219 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 LCMT1Q9UIC8 334 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 ANGPTL2Q9UKU9 493 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 PCOLCE2Q9UKZ9 415 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 HS3ST3A1Q9Y663 406 aa12.23□□□□□ -0.45
TPM4-212ENST00000590180 GOLGA8CPA6NN73 597 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 PCDHGA12O60330 932 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 BUB1BO60566 1050 aaPredicted RBP12.22□□□□□ -0.45
TPM4-212ENST00000590180 MMP20O60882 483 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 KRT7P08729 469 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 CD48P09326 243 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 IL4RP24394 825 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 PMLP29590 882 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms