RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 MSANTD2Q6P1R3 559 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 RBM43Q6ZSC3 357 aaKnown RBP6.21□□□□□ -1.42
VPS25-204ENST00000589577 TMEM135Q86UB9 458 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 CCDC117Q8IWD4 279 aaPredicted RBP6.21□□□□□ -1.42
VPS25-204ENST00000589577 Q8NA96 180 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 TTC13Q8NBP0 860 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 GPR156Q8NFN8 814 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 ANP32BQ92688 251 aaKnown RBP6.21□□□□□ -1.42
VPS25-204ENST00000589577 ERCC4Q92889 916 aaPredicted RBP6.21□□□□□ -1.42
VPS25-204ENST00000589577 ART4Q93070 314 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 ALG14Q96F25 216 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 DHTKD1Q96HY7 919 aaPredicted RBP6.21□□□□□ -1.42
VPS25-204ENST00000589577 C5orf34Q96MH7 638 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 NUDT22Q9BRQ3 303 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 DDA1Q9BW61 102 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 C1QTNF2Q9BXJ5 285 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 KIAA1586Q9HCI6 787 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 CYP4F12Q9HCS2 524 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 AGPAT3Q9NRZ7 376 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 IPO11Q9UI26 975 aaKnown RBP6.21□□□□□ -1.42
VPS25-204ENST00000589577 XPO7Q9UIA9 1087 aaKnown RBP6.21□□□□□ -1.42
VPS25-204ENST00000589577 GGT7Q9UJ14 662 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 TLK1Q9UKI8 766 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 ITGB1BP2Q9UKP3 347 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 SLC5A6Q9Y289 635 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 FRMD4BQ9Y2L6 1034 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 KCTD3Q9Y597 815 aa6.21□□□□□ -1.42
VPS25-204ENST00000589577 IGHV5-10-1A0A0J9YXX1 117 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 KPNA3O00505 521 aaPredicted RBP6.2□□□□□ -1.42
VPS25-204ENST00000589577 FPGTO14772 594 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 HGSO14964 777 aaPredicted RBP6.2□□□□□ -1.42
VPS25-204ENST00000589577 CETN3O15182 167 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 CLIC2O15247 247 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 PHACTR2O75167 634 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 GABBR2O75899 941 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 MOCS3O95396 460 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 ASS1P00966 412 aaKnown RBP6.2□□□□□ -1.42
VPS25-204ENST00000589577 TPM3P06753 285 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 PDGFRAP16234 1089 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 F8A1P23610 371 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 ERCC5P28715 1186 aaPredicted RBP6.2□□□□□ -1.42
VPS25-204ENST00000589577 SLC11A2P49281 568 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 ZNF165P49910 485 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 CYP2J2P51589 502 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 PLK1P53350 603 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 RPS21P63220 83 aaKnown RBP6.2□□□□□ -1.42
VPS25-204ENST00000589577 DLG4P78352 724 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 B4GALNT1Q00973 533 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 MYL5Q02045 173 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 BIRC3Q13489 604 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 DLG2Q15700 870 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 KNOP1Q1ED39 458 aaKnown RBP6.2□□□□□ -1.42
VPS25-204ENST00000589577 COBLL1Q53SF7 1204 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 KIAA1161Q6NSJ0 714 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 C16orf46Q6P387 395 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 LVRNQ6Q4G3 990 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 MACC1Q6ZN28 852 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 ERN2Q76MJ5 926 aaKnown RBP6.2□□□□□ -1.42
VPS25-204ENST00000589577 EPM2AIP1Q7L775 607 aaPredicted RBP6.2□□□□□ -1.42
VPS25-204ENST00000589577 CIR1Q86X95 450 aaPredicted RBP6.2□□□□□ -1.42
VPS25-204ENST00000589577 TP53INP2Q8IXH6 220 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 NELFCDQ8IXH7 590 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 CHST14Q8NCH0 376 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 OR2A12Q8NGT7 310 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 AZIN2Q96A70 460 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 CENPTQ96BT3 561 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 FCRL2Q96LA5 508 aaPredicted RBP6.2□□□□□ -1.42
VPS25-204ENST00000589577 CCDC74BQ96LY2 380 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 LENG8Q96PV6 779 aaPredicted RBP6.2□□□□□ -1.42
VPS25-204ENST00000589577 NT5C1AQ9BXI3 368 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 SRRTQ9BXP5 876 aaKnown RBP6.2□□□□□ -1.42
VPS25-204ENST00000589577 HDAC8Q9BY41 377 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 TRIM55Q9BYV6 548 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 UBXN6Q9BZV1 441 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 SLC13A1Q9BZW2 595 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 APOBEC3GQ9HC16 384 aaKnown RBP6.2□□□□□ -1.42
VPS25-204ENST00000589577 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.2□□□□□ -1.42
VPS25-204ENST00000589577 LUZP4Q9P127 313 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 GPR34Q9UPC5 381 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 CTNND2Q9UQB3 1225 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 FADS3Q9Y5Q0 445 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 ACANP16112 2415 aa6.2□□□□□ -1.42
VPS25-204ENST00000589577 IGLON5A6NGN9 336 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 K7ERQ8 282 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 PDXKO00764 312 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 B4GAT1O43505 415 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 KLRC4O43908 158 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 BNIP3LO60238 219 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 EXOC3O60645 756 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 RFPL1O75677 317 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 CLSTN1O94985 981 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 CBX6O95503 412 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 GNA14O95837 355 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 MT-CO1P00395 513 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 EPB41P11171 864 aaKnown RBP6.19□□□□□ -1.42
VPS25-204ENST00000589577 SRCP12931 536 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 KRT13P13646 458 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 ADRB3P13945 408 aa6.19□□□□□ -1.42
VPS25-204ENST00000589577 PRKCSHP14314 528 aaPredicted RBP6.19□□□□□ -1.42
VPS25-204ENST00000589577 PNLIPP16233 465 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms