RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 NCEH1Q6PIU2 408 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 DPY19L3Q6ZPD9 716 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 KLHDC8BQ8IXV7 354 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 TMIEQ8NEW7 156 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 ARRDC2Q8TBH0 407 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 HCAR2Q8TDS4 363 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 PPP1R16AQ96I34 528 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 EXOC2Q96KP1 924 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 ACOX2Q99424 681 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 POLMQ9NP87 494 aaPredicted RBP17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 PRSS16Q9NQE7 514 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 EIF2B3Q9NR50 452 aaKnown RBP17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 RAB6BQ9NRW1 208 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 AP3B1O00203 1094 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 ADAM23O75077 832 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 EPOP01588 193 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 C7P10643 843 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 HLA-EP13747 358 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 ADCY8P40145 1251 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 CD86P42081 329 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 CLCN5P51795 746 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 RPL26P61254 145 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 DSC2Q02487 901 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 ZBTB16Q05516 673 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 BCL2L1Q07817 233 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 CCDC15Q0P6D6 951 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 CFAP58Q5T655 872 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 ATXN7L2Q5T6C5 722 aaPredicted RBP17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 SPEM1Q8N4L4 309 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 NOA1Q8NC60 698 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 OR2T3Q8NH03 318 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 SPOCK2Q92563 424 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 TADA1Q96BN2 335 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 ERP44Q9BS26 406 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 FSD1LQ9BXM9 530 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 FAM129AQ9BZQ8 928 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 RSPH9Q9H1X1 276 aaPredicted RBP17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 ZDHHC6Q9H6R6 413 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 LRRC40Q9H9A6 602 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 NOD2Q9HC29 1040 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 SCML1Q9UN30 329 aa17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 RPL26L1Q9UNX3 145 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 MTF2Q9Y483 593 aaPredicted RBP17.16■□□□□ 0.34
SCAMP4-211ENST00000588907 TRIOO75962 3097 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 TMEM221A6NGB7 291 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 M0R296 226 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 BNIP3LO60238 219 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 AP2A1O95782 977 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 ADH1BP00325 375 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 ZSCAN5DPP0CG00 497 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 TPSB2P20231 275 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 MAGEA6P43360 314 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 RGRP47804 291 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 LMAN1P49257 510 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 DRG2P55039 364 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 POLR2LP62875 67 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 BASP1P80723 227 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 SARNPP82979 210 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 SKOR1P84550 965 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 CALCOCO2Q13137 446 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 FZD5Q13467 585 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 TRIP13Q15645 432 aaPredicted RBP17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 TPSAB1Q15661 275 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 CRY1Q16526 586 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 ZNF776Q68DI1 518 aaPredicted RBP17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 NAPEPLDQ6IQ20 393 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 BRAT1Q6PJG6 821 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 MAMSTRQ6ZN01 415 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 LINC00523Q86TU6 105 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 HOOK3Q86VS8 718 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 NDUFAF2Q8N183 169 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 GLIS1Q8NBF1 620 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 FLCNQ8NFG4 579 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 RUBCNQ92622 972 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 SNF8Q96H20 258 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 FEM1CQ96JP0 617 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 ADGRE3Q9BY15 652 aa17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 EVLQ9UI08 416 aaPredicted RBP17.15■□□□□ 0.34
SCAMP4-211ENST00000588907 ALDH1A2O94788 518 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 METTL18O95568 372 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 MMP2P08253 660 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 ETS1P14921 441 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 AOC1P19801 751 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 VPS41P49754 854 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 SUOXP51687 545 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 NRLP54845 237 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 CAV1Q03135 178 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 NIPAL4Q0D2K0 466 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 ARMC12Q5T9G4 340 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 GDPD4Q6W3E5 623 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 Q6ZS52 159 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 PRPF39Q86UA1 669 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 PPIL6Q8IXY8 311 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 STK40Q8N2I9 435 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 ZNF366Q8N895 744 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 IFT43Q96FT9 208 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 RBM15Q96T37 977 aaKnown RBP eCLIP17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 LRRC1Q9BTT6 524 aa17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 TDRD1Q9BXT4 1180 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-211ENST00000588907 FRMD8Q9BZ67 464 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms