RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 LINC00597Q9H2U6 94 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 ZNF576Q9H609 170 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 MRM3Q9HC36 420 aaKnown RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 SCUBE2Q9NQ36 999 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 SMYD2Q9NRG4 433 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 ABCB8Q9NUT2 735 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 GDE1Q9NZC3 331 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 LMCD1Q9NZU5 365 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 CDH22Q9UJ99 828 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 INTS6Q9UL03 887 aaKnown RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 FCF1Q9Y324 198 aaKnown RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 TCAF1Q9Y4C2 921 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 CDH23Q9H251 3354 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 ZCWPW2A0A1B0GU75 182 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 PIAS1O75925 651 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 EPOP01588 193 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 CYP17A1P05093 508 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 FGF1P05230 155 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 PABPC1P11940 636 aaKnown RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 HOXB8P17481 243 aaPredicted RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 HLA-DPA1P20036 260 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 KCNA4P22459 653 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 VIPR2P41587 438 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 SCNN1BP51168 640 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 CDK18Q07002 472 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 MGAT5Q09328 741 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 ADAM15Q13444 863 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 POU6F1Q14863 301 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 SLC1A5Q15758 541 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 FUT11Q495W5 492 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 ANKRD20A4Q4UJ75 823 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 RALGPS1Q5JS13 557 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 SIRPB2Q5JXA9 342 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 ASTLQ6HA08 431 aaPredicted RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 CES3Q6UWW8 571 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 MARK2Q7KZI7 788 aaKnown RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 KDELC2Q7Z4H8 507 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 METTL3Q86U44 580 aaKnown RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 EXOC3L1Q86VI1 746 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 SLC26A11Q86WA9 606 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 CTAGE3PQ8IX95 158 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 UNC5BQ8IZJ1 945 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 ADGRG2Q8IZP9 1017 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 BPIFB1Q8TDL5 484 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 CDKL2Q92772 493 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 CERS2Q96G23 380 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 FCRL3Q96P31 734 aaPredicted RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 LRRC3BQ96PB8 259 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 TRIB3Q96RU7 358 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 RANBP9Q96S59 729 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 TDRD1Q9BXT4 1180 aaKnown RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 TRPV4Q9HBA0 871 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 NOD2Q9HC29 1040 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 CHRAC1Q9NRG0 131 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 DUS2Q9NX74 493 aaKnown RBP11.54□□□□□ -0.56
SMAD4-205ENST00000588745 OBP2AQ9NY56 170 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 PRKAG3Q9UGI9 489 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 ZNF180Q9UJW8 692 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 GGA2Q9UJY4 613 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 ADAM21Q9UKJ8 722 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 ACTL7BQ9Y614 415 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 IKBKGQ9Y6K9 419 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 FAM169AQ9Y6X4 670 aa11.54□□□□□ -0.56
SMAD4-205ENST00000588745 DENND4AQ7Z401 1863 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 PDE4DIPQ5VU43 2346 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 COL4A3Q01955 1670 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 IQANK1A0A1B0GTG1 560 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 CXorf49A8MYA2 514 aaPredicted RBP11.53□□□□□ -0.56
SMAD4-205ENST00000588745 ADH1CP00326 375 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 MT-CO1P00395 513 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 KRT15P19012 456 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 FCARP24071 287 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 NMBRP28336 390 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 ATP1A2P50993 1020 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 SLC20A2Q08357 652 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 NSUN2Q08J23 767 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMAD4-205ENST00000588745 SEPT6Q14141 434 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 DMC1Q14565 340 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 DHCR24Q15392 516 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 EML3Q32P44 896 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 PKN3Q6P5Z2 889 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 TRABD2AQ86V40 505 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 RASSF3Q86WH2 238 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 RNF135Q8IUD6 432 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 MZB1Q8WU39 189 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 MFSD3Q96ES6 412 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 NSMCE3Q96MG7 304 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 SLC2A11Q9BYW1 496 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 CNOT10Q9H9A5 744 aaKnown RBP11.53□□□□□ -0.56
SMAD4-205ENST00000588745 PPANQ9NQ55 473 aaKnown RBP11.53□□□□□ -0.56
SMAD4-205ENST00000588745 SENP1Q9P0U3 644 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 CLEC1BQ9P126 229 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 CDH7Q9ULB5 785 aa11.53□□□□□ -0.56
SMAD4-205ENST00000588745 MYOFQ9NZM1 2061 aa11.52□□□□□ -0.57
SMAD4-205ENST00000588745 HEATR9A2RTY3 570 aa11.52□□□□□ -0.57
SMAD4-205ENST00000588745 HEPACAM2A8MVW5 462 aa11.52□□□□□ -0.57
SMAD4-205ENST00000588745 K7ERQ8 282 aa11.52□□□□□ -0.57
SMAD4-205ENST00000588745 HOXC11O43248 304 aaPredicted RBP11.52□□□□□ -0.57
SMAD4-205ENST00000588745 SMAD6O43541 496 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms