RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 RAB7BQ96AH8 199 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 CRELD1Q96HD1 420 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 LRIG1Q96JA1 1093 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 DCBLD2Q96PD2 775 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 CNPY3Q9BT09 278 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 C1QTNF2Q9BXJ5 285 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 GPR27Q9NS67 375 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 KLF15Q9UIH9 416 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 AK5Q9Y6K8 562 aa14.55□□□□□ -0.08
VMP1-206ENST00000587945 COL5A1P20908 1838 aaPredicted RBP14.55□□□□□ -0.08
VMP1-206ENST00000587945 ANKRD62A6NC57 917 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 ZSCAN5CA6NGD5 496 aaPredicted RBP14.54□□□□□ -0.08
VMP1-206ENST00000587945 GOLGA6L22H0YM25 854 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 FPGTO14772 594 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 AREL1O15033 823 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 ATMINO43313 823 aaPredicted RBP14.54□□□□□ -0.08
VMP1-206ENST00000587945 MMP20O60882 483 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 TNFAIP3P21580 790 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 RABIFP47224 123 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 RHOAP61586 193 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 PDE1CQ14123 709 aaPredicted RBP14.54□□□□□ -0.08
VMP1-206ENST00000587945 CYTH1Q15438 398 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 TTC7BQ86TV6 843 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 DCP2Q8IU60 420 aaKnown RBP14.54□□□□□ -0.08
VMP1-206ENST00000587945 FAM174AQ8TBP5 190 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 RFFLQ8WZ73 363 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 NXPE2Q96DL1 559 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 IFT43Q96FT9 208 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 EXOC2Q96KP1 924 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 APOLD1Q96LR9 279 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 GDAP1L1Q96MZ0 367 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 LENG8Q96PV6 779 aaPredicted RBP14.54□□□□□ -0.08
VMP1-206ENST00000587945 EPAS1Q99814 870 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 SYT11Q9BT88 431 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 OSBPL1AQ9BXW6 950 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 TTYH3Q9C0H2 523 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 TMEM63CQ9P1W3 806 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 IPO11Q9UI26 975 aaKnown RBP14.54□□□□□ -0.08
VMP1-206ENST00000587945 CLCA2Q9UQC9 943 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 ACACAQ13085 2346 aa14.54□□□□□ -0.08
VMP1-206ENST00000587945 LY6G6EA0A0G2JKS1 128 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 SPTY2D1-AS1A0A0U1RR47 76 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 WASH4PA8MWX3 477 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 K7ESM1 405 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 SCAMP1O15126 338 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 TLX3O43711 291 aaPredicted RBP14.53□□□□□ -0.08
VMP1-206ENST00000587945 IGSF6O95976 241 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 MT-CO3P00414 261 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 CSF2P04141 144 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 ALPPL2P10696 532 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 CKMT1AP12532 417 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 TIMP2P16035 220 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 YBEYP58557 167 aaPredicted RBP14.53□□□□□ -0.08
VMP1-206ENST00000587945 PFN3P60673 137 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 HNRNPKP61978 463 aaKnown RBP eCLIP14.53□□□□□ -0.08
VMP1-206ENST00000587945 EIF2B5Q13144 721 aaKnown RBP14.53□□□□□ -0.08
VMP1-206ENST00000587945 MAMLD1Q13495 774 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 SERINC3Q13530 473 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 CA9Q16790 459 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 ANO6Q4KMQ2 910 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 VPS36Q86VN1 386 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 ZNF548Q8NEK5 533 aaPredicted RBP14.53□□□□□ -0.08
VMP1-206ENST00000587945 CELF6Q96J87 481 aaKnown RBP14.53□□□□□ -0.08
VMP1-206ENST00000587945 CATSPERBQ9H7T0 1116 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 SCUBE2Q9NQ36 999 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 NLGN3Q9NZ94 848 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 LHX3Q9UBR4 397 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 U3KQA8 63 aa14.53□□□□□ -0.08
VMP1-206ENST00000587945 URB1O60287 2271 aaKnown RBP14.52□□□□□ -0.08
VMP1-206ENST00000587945 KNTC1P50748 2209 aa14.52□□□□□ -0.08
VMP1-206ENST00000587945 A0A087WV48 116 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 NEMP2A6NFY4 417 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 LRRC53A6NM62 1247 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 J3KR12 359 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 PIGNO95427 931 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 MBD3O95983 291 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 CCDC172P0C7W6 258 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 NME1P15531 152 aaKnown RBP14.52□□□□□ -0.09
VMP1-206ENST00000587945 JUNDP17535 347 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 PSMA2P25787 234 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 IGFALSP35858 605 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 TPI1P60174 286 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 E2F1Q01094 437 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 RAD51Q06609 339 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 RTP5Q14D33 572 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 PARP15Q460N3 678 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 INO80DQ53TQ3 878 aaPredicted RBP14.52□□□□□ -0.09
VMP1-206ENST00000587945 ZSCAN30Q86W11 494 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 PARGQ86W56 976 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 UMODL1-AS1Q8N2C9 162 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 ARFGAP1Q8N6T3 406 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 DCBLD1Q8N8Z6 715 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 LMX1AQ8TE12 382 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 CASKIN2Q8WXE0 1202 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 ASB12Q8WXK4 309 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 CENPTQ96BT3 561 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 WRAP53Q9BUR4 548 aaKnown RBP14.52□□□□□ -0.09
VMP1-206ENST00000587945 TRIM7Q9C029 511 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 NRSN2Q9GZP1 204 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 TCEAL2Q9H3H9 227 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms