RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 MARCH5Q9NX47 278 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 WBP1LQ9NX94 342 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 OR12D3Q9UGF7 316 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 RABGEF1Q9UJ41 708 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 PADI4Q9UM07 663 aa9.78□□□□□ -0.84
LINC01539-201ENST00000587904 VWA8A3KMH1 1905 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 TMEM120BA0PK00 339 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 FAM92AA1XBS5 289 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 CENPBD1B2RD01 187 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 GSC2O15499 205 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 MAP3K6O95382 1288 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 RPL17P18621 184 aaKnown RBP9.77□□□□□ -0.85
LINC01539-201ENST00000587904 GCAP28676 217 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 HOXC13P31276 330 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 SLC5A2P31639 672 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 ELK3P41970 407 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 SLC11A1P49279 550 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 RAP1GDS1P52306 607 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 SLC18A1P54219 525 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 AP2B1P63010 937 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 NRG1Q02297 640 aaPredicted RBP9.77□□□□□ -0.85
LINC01539-201ENST00000587904 GALNT2Q10471 571 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 TMED2Q15363 201 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 ANKRD20A4Q4UJ75 823 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 FUT10Q6P4F1 479 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 UGT2A3Q6UWM9 527 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 ANKS3Q6ZW76 656 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 SCN4BQ8IWT1 228 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 OR6Y1Q8NGX8 325 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 SUN5Q8TC36 379 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 ZNF398Q8TD17 642 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 P2RY11Q96G91 374 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 BTBD9Q96Q07 612 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 VAT1Q99536 393 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 MIPEPQ99797 713 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 WDR83Q9BRX9 315 aaKnown RBP9.77□□□□□ -0.85
LINC01539-201ENST00000587904 DHRS4Q9BTZ2 278 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 RNF208Q9H0X6 261 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 PRDM12Q9H4Q4 367 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 EBF3Q9H4W6 596 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 ZNF304Q9HCX3 659 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 SSU72Q9NP77 194 aaKnown RBP9.77□□□□□ -0.85
LINC01539-201ENST00000587904 TMPRSS4Q9NRS4 437 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 IL37Q9NZH6 218 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 FNIP2Q9P278 1114 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 IGSF9Q9P2J2 1179 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 ERVK-11Q9UQG0 969 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 MFHAS1Q9Y4C4 1052 aa9.77□□□□□ -0.85
LINC01539-201ENST00000587904 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 CCDC160A6NGH7 325 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 FAM72CH0Y354 149 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 I6L893 689 aaPredicted RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 TRDMT1O14717 391 aaKnown RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 LRIG2O94898 1065 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 METTL18O95568 372 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 OR4Q2P0C623 313 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 SLC2A3P11169 496 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 BRAFP15056 766 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 RFC2P35250 354 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 HNRNPFP52597 415 aaKnown RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 THOP1P52888 689 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 GPR17Q13304 367 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 NADK2Q4G0N4 442 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 TMTC4Q5T4D3 741 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 FAM72AQ5TYM5 149 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 FAM72DQ6L9T8 149 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 SLC39A5Q6ZMH5 540 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 RGS9BPQ6ZS82 235 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 CTU1Q7Z7A3 348 aaKnown RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 SCD5Q86SK9 330 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 TRABD2AQ86V40 505 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 CAND1Q86VP6 1230 aaKnown RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 FAM72BQ86X60 149 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 SIX5Q8N196 739 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 TAB3Q8N5C8 712 aaPredicted RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 LZTR1Q8N653 840 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 VPS37AQ8NEZ2 397 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 ZFP28Q8NHY6 868 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 CALML6Q8TD86 181 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 CHPT1Q8WUD6 406 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 DPF3Q92784 378 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 EGLN2Q96KS0 407 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 SPATA17Q96L03 361 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 LGMNQ99538 433 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 OLFM1Q99784 485 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 ANLNQ9NQW6 1124 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 AASDHPPTQ9NRN7 309 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 OLA1Q9NTK5 396 aaKnown RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 TRHDEQ9UKU6 1024 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 SMG5Q9UPR3 1016 aaKnown RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 CARNS1A5YM72 827 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 ERI2A8K979 691 aaKnown RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 POC1B-GALNT4F8VUJ3 575 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 PRPF4O43172 522 aaKnown RBP eCLIP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 TBC1D4O60343 1298 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 FKBP6O75344 327 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 BANF1O75531 89 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 GALTP07902 379 aa9.76□□□□□ -0.85
LINC01539-201ENST00000587904 MZF1P28698 734 aaPredicted RBP9.76□□□□□ -0.85
LINC01539-201ENST00000587904 SSTR1P30872 391 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms