RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 GALNT7Q86SF2 657 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 SLC41A1Q8IVJ1 513 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 SLC22A9Q8IVM8 553 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 ATPAF2Q8N5M1 289 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 CCNYL1Q8N7R7 359 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 RNF169Q8NCN4 708 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 C2CD4AQ8NCU7 369 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-206ENST00000587730 ZSCAN18Q8TBC5 510 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-206ENST00000587730 TRPC4APQ8TEL6 797 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 GFM2Q969S9 779 aaKnown RBP18.79■□□□□ 0.6
DDX39A-206ENST00000587730 SMARCD1Q96GM5 515 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 OSBPL11Q9BXB4 747 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 FTHL17Q9BXU8 183 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 TKTL2Q9H0I9 626 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 TCAF1Q9Y4C2 921 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 LRIG2O94898 1065 aa18.78■□□□□ 0.6
DDX39A-206ENST00000587730 HSPA8P11142 646 aaKnown RBP18.78■□□□□ 0.6
DDX39A-206ENST00000587730 PCSK1P29120 753 aa18.78■□□□□ 0.6
DDX39A-206ENST00000587730 ABCG1P45844 678 aa18.78■□□□□ 0.6
DDX39A-206ENST00000587730 CRYBB1P53674 252 aaPredicted RBP18.78■□□□□ 0.6
DDX39A-206ENST00000587730 PSME3P61289 254 aa18.78■□□□□ 0.6
DDX39A-206ENST00000587730 ITGA7Q13683 1181 aa18.78■□□□□ 0.6
DDX39A-206ENST00000587730 APOFQ13790 326 aa18.78■□□□□ 0.6
DDX39A-206ENST00000587730 ACVR1CQ8NER5 493 aa18.78■□□□□ 0.6
DDX39A-206ENST00000587730 LZICQ8WZA0 190 aa18.78■□□□□ 0.6
DDX39A-206ENST00000587730 IL12RB2Q99665 862 aa18.78■□□□□ 0.6
DDX39A-206ENST00000587730 APOL2Q9BQE5 337 aa18.78■□□□□ 0.6
DDX39A-206ENST00000587730 MEAF6Q9HAF1 191 aa18.78■□□□□ 0.6
DDX39A-206ENST00000587730 GLOD4Q9HC38 313 aa18.78■□□□□ 0.6
DDX39A-206ENST00000587730 FNIP2Q9P278 1114 aa18.78■□□□□ 0.6
DDX39A-206ENST00000587730 IPPQ9Y573 584 aa18.78■□□□□ 0.6
DDX39A-206ENST00000587730 HEATR9A2RTY3 570 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 PSMC3P17980 439 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 SAT1P21673 171 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 SLC26A3P40879 764 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 GLRBP48167 497 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 ARCN1P48444 511 aaKnown RBP18.77■□□□□ 0.6
DDX39A-206ENST00000587730 INHBCP55103 352 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 PKNOX1P55347 436 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 RHDQ02161 417 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 TRIM67Q6ZTA4 783 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 TMEM102Q8N9M5 508 aaPredicted RBP18.77■□□□□ 0.6
DDX39A-206ENST00000587730 PBXIP1Q96AQ6 731 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 PPP1R10Q96QC0 940 aaKnown RBP18.77■□□□□ 0.6
DDX39A-206ENST00000587730 SMOQ99835 787 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 PKP2Q99959 881 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 SLC25A23Q9BV35 468 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 SLC2A11Q9BYW1 496 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 CATSPERBQ9H7T0 1116 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 CDHR5Q9HBB8 845 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 SPAG4Q9NPE6 437 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 UBAP1Q9NZ09 502 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 AP4S1Q9Y587 144 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 SQORQ9Y6N5 450 aa18.77■□□□□ 0.6
DDX39A-206ENST00000587730 MYO18AQ92614 2054 aaKnown RBP18.77■□□□□ 0.6
DDX39A-206ENST00000587730 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.77■□□□□ 0.59
DDX39A-206ENST00000587730 DYTNA2CJ06 578 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 PGM3O95394 542 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 ASLP04424 464 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 GABRB3P28472 473 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 CLCN5P51795 746 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 MS4A2Q01362 244 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 SAMD4BQ5PRF9 694 aaKnown RBP18.77■□□□□ 0.59
DDX39A-206ENST00000587730 BRMS1LQ5PSV4 323 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 DLK2Q6UY11 383 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 RBM44Q6ZP01 1051 aaKnown RBP18.77■□□□□ 0.59
DDX39A-206ENST00000587730 USP50Q70EL3 339 aaPredicted RBP18.77■□□□□ 0.59
DDX39A-206ENST00000587730 EME1Q96AY2 570 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 NXNL1Q96CM4 212 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 ELMO2Q96JJ3 720 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 ZNF597Q96LX8 424 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 CNBD2Q96M20 576 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 POMKQ9H5K3 350 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 TRPC7Q9HCX4 862 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 CRTAC1Q9NQ79 661 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 ANLNQ9NQW6 1124 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 TBC1D13Q9NVG8 400 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 ADA2Q9NZK5 511 aa18.77■□□□□ 0.59
DDX39A-206ENST00000587730 VILLO15195 856 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 UBDO15205 165 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 MATN3O15232 486 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 PGK1P00558 417 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 ACADVLP49748 655 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 TXNL4AP83876 142 aaKnown RBP18.76■□□□□ 0.59
DDX39A-206ENST00000587730 FAM45BPQ6NSW5 357 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 DPP9Q86TI2 863 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 LILRA2Q8N149 483 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 DRAXINQ8NBI3 349 aaPredicted RBP18.76■□□□□ 0.59
DDX39A-206ENST00000587730 ADAM32Q8TC27 787 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 FAM45AQ8TCE6 357 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 USP13Q92995 863 aaPredicted RBP18.76■□□□□ 0.59
DDX39A-206ENST00000587730 LENG1Q96BZ8 264 aaPredicted RBP18.76■□□□□ 0.59
DDX39A-206ENST00000587730 TMA16Q96EY4 203 aaKnown RBP18.76■□□□□ 0.59
DDX39A-206ENST00000587730 CDCA5Q96FF9 252 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 MPP4Q96JB8 637 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 SENP8Q96LD8 212 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 UHRF1Q96T88 793 aaPredicted RBP18.76■□□□□ 0.59
DDX39A-206ENST00000587730 GOLGA2P5Q9HBQ8 144 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 CSNK1G1Q9HCP0 422 aa18.76■□□□□ 0.59
DDX39A-206ENST00000587730 TREX1Q9NSU2 369 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms