RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 LINC00597Q9H2U6 94 aa20.71■□□□□ 0.91
ATG4D-204ENST00000586417 TRPV4Q9HBA0 871 aa20.71■□□□□ 0.91
ATG4D-204ENST00000586417 LSM7Q9UK45 103 aaKnown RBP20.71■□□□□ 0.91
ATG4D-204ENST00000586417 FAM237BA0A1B0GVD1 139 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 E2F8A0AVK6 867 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 SRRM3A6NNA2 597 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-204ENST00000586417 KDELR3O43731 214 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 ATP9BO43861 1147 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 GLDCP23378 1020 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 ETFBP38117 255 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 WNT3AP56704 352 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 FRG1Q14331 258 aaKnown RBP20.7■□□□□ 0.9
ATG4D-204ENST00000586417 IL31Q6EBC2 164 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 PARM1Q6UWI2 310 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 MARK2Q7KZI7 788 aaKnown RBP20.7■□□□□ 0.9
ATG4D-204ENST00000586417 HJURPQ8NCD3 748 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-204ENST00000586417 FGF14Q92915 247 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 PLA2G2FQ9BZM2 168 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 ATP13A1Q9HD20 1204 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 KCNK9Q9NPC2 374 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 VPS45Q9NRW7 570 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 INTS9Q9NV88 658 aaKnown RBP20.7■□□□□ 0.9
ATG4D-204ENST00000586417 SOX13Q9UN79 622 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 ACTL7AQ9Y615 435 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 IKBKGQ9Y6K9 419 aa20.7■□□□□ 0.9
ATG4D-204ENST00000586417 IQANK1A0A1B0GTG1 560 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 ZCWPW2A0A1B0GU75 182 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 MAGEB16A2A368 324 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 HEPACAM2A8MVW5 462 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 TBL1XO60907 577 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 USP1O94782 785 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 TCF3P15923 654 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 CD86P42081 329 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 ITKQ08881 620 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 ANKRD20A4Q4UJ75 823 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 ZNF449Q6P9G9 518 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 CCDC117Q8IWD4 279 aaPredicted RBP20.69■□□□□ 0.9
ATG4D-204ENST00000586417 C4orf33Q8N1A6 199 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 SPON2Q9BUD6 331 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 RPP25Q9BUL9 199 aaKnown RBP20.69■□□□□ 0.9
ATG4D-204ENST00000586417 WNT6Q9Y6F9 365 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 TTC24A2A3L6 582 aaPredicted RBP20.69■□□□□ 0.9
ATG4D-204ENST00000586417 PRPF4O43172 522 aaKnown RBP eCLIP20.69■□□□□ 0.9
ATG4D-204ENST00000586417 OXCT1P55809 520 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 LEXMQ3ZCV2 418 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 FSCBQ5H9T9 825 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 ALG1LQ6GMV1 187 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 ZNF783Q6ZMS7 281 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 CPXM2Q8N436 756 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 ZNF669Q96BR6 464 aaPredicted RBP20.69■□□□□ 0.9
ATG4D-204ENST00000586417 CERS2Q96G23 380 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 SMC6Q96SB8 1091 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 KXD1Q9BQD3 176 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 KIFC1Q9BW19 673 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 FSD1LQ9BXM9 530 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 ARNT2Q9HBZ2 717 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 ZFP14Q9HCL3 533 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 SSU72Q9NP77 194 aaKnown RBP20.69■□□□□ 0.9
ATG4D-204ENST00000586417 CHRAC1Q9NRG0 131 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 FAM169AQ9Y6X4 670 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 MYLKQ15746 1914 aa20.69■□□□□ 0.9
ATG4D-204ENST00000586417 TYROBPO43914 113 aa20.68■□□□□ 0.9
ATG4D-204ENST00000586417 SPAG7O75391 227 aa20.68■□□□□ 0.9
ATG4D-204ENST00000586417 GJB3O75712 270 aa20.68■□□□□ 0.9
ATG4D-204ENST00000586417 CHRNA4P43681 627 aa20.68■□□□□ 0.9
ATG4D-204ENST00000586417 ZNF235Q14590 738 aa20.68■□□□□ 0.9
ATG4D-204ENST00000586417 RNF219Q5W0B1 726 aaPredicted RBP20.68■□□□□ 0.9
ATG4D-204ENST00000586417 VITQ6UXI7 678 aa20.68■□□□□ 0.9
ATG4D-204ENST00000586417 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.68■□□□□ 0.9
ATG4D-204ENST00000586417 MFSD3Q96ES6 412 aa20.68■□□□□ 0.9
ATG4D-204ENST00000586417 TMA16Q96EY4 203 aaKnown RBP20.68■□□□□ 0.9
ATG4D-204ENST00000586417 ASIC4Q96FT7 647 aa20.68■□□□□ 0.9
ATG4D-204ENST00000586417 ZFYVE19Q96K21 471 aa20.68■□□□□ 0.9
ATG4D-204ENST00000586417 POLR1EQ9GZS1 481 aaKnown RBP20.68■□□□□ 0.9
ATG4D-204ENST00000586417 EPN3Q9H201 632 aa20.68■□□□□ 0.9
ATG4D-204ENST00000586417 SLC17A6Q9P2U8 582 aa20.68■□□□□ 0.9
ATG4D-204ENST00000586417 ZNF510Q9Y2H8 683 aa20.68■□□□□ 0.9
ATG4D-204ENST00000586417 FAM47DPA6NHR8 397 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 C2CD4DB7Z1M9 353 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 LUC7L3O95232 432 aaKnown RBP20.67■□□□□ 0.9
ATG4D-204ENST00000586417 KRT4P19013 534 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 SEC24CP53992 1094 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 SLC18A1P54219 525 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 MGAT5Q09328 741 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 NAB1Q13506 487 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 PCSK7Q16549 785 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 SH2D5Q6ZV89 423 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 CARNMT1Q8N4J0 409 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 ANKRD42Q8N9B4 389 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 BPIFB1Q8TDL5 484 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 DENND1AQ8TEH3 1009 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 BHMTQ93088 406 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 SERAC1Q96JX3 654 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 MGME1Q9BQP7 344 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 CCDC134Q9H6E4 229 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 PPANQ9NQ55 473 aaKnown RBP20.67■□□□□ 0.9
ATG4D-204ENST00000586417 IL1RAPL1Q9NZN1 696 aa20.67■□□□□ 0.9
ATG4D-204ENST00000586417 UBA2Q9UBT2 640 aaPredicted RBP20.67■□□□□ 0.9
ATG4D-204ENST00000586417 SMG5Q9UPR3 1016 aaKnown RBP20.67■□□□□ 0.9
ATG4D-204ENST00000586417 OR51B4Q9Y5P0 310 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms