RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	CT47A1	Q5JQC4	288 aa	Predicted RBP	16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	ZCCHC8	Q6NZY4	707 aa	Known RBP	16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	STRADA	Q7RTN6	431 aa		16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	GPR155	Q7Z3F1	870 aa		16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	TTC7B	Q86TV6	843 aa		16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	CCDC185	Q8N715	623 aa		16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	MAPK15	Q8TD08	544 aa		16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	LMX1A	Q8TE12	382 aa		16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	ZNF578	Q96N58	590 aa	Predicted RBP	16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	KLHL32	Q96NJ5	620 aa		16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	C11orf70	Q9BRQ4	267 aa		16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	VPS16	Q9H269	839 aa		16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	NOL6	Q9H6R4	1146 aa	Known RBP	16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	POLR1B	Q9H9Y6	1135 aa		16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	SALL4	Q9UJQ4	1053 aa		16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	PNMA8B	Q9ULN7	279 aa	Predicted RBP	16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	HPCAL4	Q9UM19	191 aa		16.61	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	GCN1	Q92616	2671 aa	Known RBP	16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	EPHB6	O15197	1021 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	MMP20	O60882	483 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	RAMP2	O60895	175 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	GCAT	O75600	419 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	C1QL1	O75973	258 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	DXO	O77932	396 aa	Known RBP	16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	KRT3	P12035	628 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	UNG	P13051	313 aa	Predicted RBP	16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	TGM2	P21980	687 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	SOX5	P35711	763 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	JAM2	P57087	298 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	GEMIN4	P57678	1058 aa	Known RBP	16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	GABRE	P78334	506 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	C19orf57	Q0VDD7	668 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	DEFB133	Q30KQ1	61 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	GDPD4	Q6W3E5	623 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	LSMEM2	Q8N112	164 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	NETO2	Q8NC67	525 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	LSM14A	Q8ND56	463 aa	Known RBP	16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	ENOX1	Q8TC92	643 aa	Known RBP	16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	TBC1D31	Q96DN5	1066 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	NAF1	Q96HR8	494 aa	Known RBP	16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	KLC2	Q9H0B6	622 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	TCEAL2	Q9H3H9	227 aa	Predicted RBP	16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	NLRC4	Q9NPP4	1024 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	CHMP5	Q9NZZ3	219 aa		16.6	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	PTPRQ	Q9UMZ3	2332 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460		A0A1W2PNU3	283 aa	Predicted RBP	16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	EME2	A4GXA9	379 aa	Predicted RBP	16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460		H3BM21	787 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	TPP1	O14773	563 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	BUB1	O43683	1085 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	TIMP2	P16035	220 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	C1orf61	Q13536	156 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	ISX	Q2M1V0	245 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	GUSBP11	Q6P575	273 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	WDR59	Q6PJI9	974 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	PCSK4	Q6UW60	755 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	EFL1	Q7Z2Z2	1120 aa	Known RBP	16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	PYROXD2	Q8N2H3	581 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	ZNF248	Q8NDW4	579 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	DENND6B	Q8NEG7	585 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	FAM172A	Q8WUF8	416 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	LGMN	Q99538	433 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	OSBPL1A	Q9BXW6	950 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	NUP62CL	Q9H1M0	184 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	MBNL1	Q9NR56	388 aa	Known RBP	16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	FAM207A	Q9NSI2	230 aa	Predicted RBP	16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	EVA1B	Q9NVM1	165 aa		16.59	■□□□□ 0.25
PRKAR1A-206	ENST00000585460	TEX51	A0A1B0GUA7	166 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	LZTS3	O60299	673 aa	Predicted RBP	16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	ADK	P55263	362 aa	Known RBP	16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	ERVPABLB-1	P60509	514 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	CXADR	P78310	365 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	KRT31	Q15323	416 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	LRRC73	Q5JTD7	316 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	CDKAL1	Q5VV42	579 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	TRIM72	Q6ZMU5	477 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	SLFN11	Q7Z7L1	901 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	VPS36	Q86VN1	386 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	RBFA	Q8N0V3	343 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	BTN2A2	Q8WVV5	523 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	NTAN1	Q96AB6	310 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	ARHGEF26	Q96DR7	871 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	IL12RB2	Q99665	862 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	TTYH3	Q9C0H2	523 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	ASCL3	Q9NQ33	180 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	NCKIPSD	Q9NZQ3	722 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	ADAM22	Q9P0K1	906 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	SPAST	Q9UBP0	616 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	SIK3	Q9Y2K2	1263 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	MFHAS1	Q9Y4C4	1052 aa		16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	NYNRIN	Q9P2P1	1898 aa	Known RBP	16.58	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	TP53BP1	Q12888	1972 aa	Predicted RBP	16.57	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	16.57	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	SIGLEC16	A6NMB1	481 aa		16.57	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	CASC3	O15234	703 aa	Known RBP	16.57	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	YY2	O15391	372 aa		16.57	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	TMCC1	O94876	653 aa		16.57	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	IGFALS	P35858	605 aa		16.57	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	EIF4A3	P38919	411 aa	Known RBP	16.57	■□□□□ 0.24

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms