RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SIK3Q9Y2K2 1263 aa11.37□□□□□ -0.59
CCDC47-206ENST00000584112 A0A1B0GTQ1 180 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 ILVBLA1L0T0 632 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 LGALS16A8MUM7 142 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 C10orf142B7Z368 130 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 I6L893 689 aaPredicted RBP11.36□□□□□ -0.59
CCDC47-206ENST00000584112 YKT6O15498 198 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 PLRG1O43660 514 aaKnown RBP11.36□□□□□ -0.59
CCDC47-206ENST00000584112 BNIP3LO60238 219 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 SRGAP2O75044 1071 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 RTN2O75298 545 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 ENDOD1O94919 500 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 ITGAVP06756 1048 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 SRCP12931 536 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 CDK11BP21127 795 aaKnown RBP11.36□□□□□ -0.59
CCDC47-206ENST00000584112 MMP8P22894 467 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 CD38P28907 300 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 SDC4P31431 198 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 NSFP46459 744 aaKnown RBP11.36□□□□□ -0.59
CCDC47-206ENST00000584112 KLK7P49862 253 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 CYP4F2P78329 520 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 ATP11AP98196 1134 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 UBXN1Q04323 297 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 CCDC183Q5T5S1 534 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 TRNP1Q6NT89 227 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 TFAP2DQ7Z6R9 452 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 PRPF39Q86UA1 669 aaKnown RBP11.36□□□□□ -0.59
CCDC47-206ENST00000584112 FAM131BQ86XD5 332 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 SERAC1Q96JX3 654 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 C11orf70Q9BRQ4 267 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 REPIN1Q9BWE0 567 aaKnown RBP11.36□□□□□ -0.59
CCDC47-206ENST00000584112 ZYG11BQ9C0D3 744 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 RETREG1Q9H6L5 497 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 MPP6Q9NZW5 540 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 VPS51Q9UID3 782 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 PPM1HQ9ULR3 514 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 ESPL1Q14674 2120 aa11.36□□□□□ -0.59
CCDC47-206ENST00000584112 FAM170AA1A519 330 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 EPHB6O15197 1021 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 LATO43561 262 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 MAGEC1O60732 1142 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 PRNPP04156 253 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 CHRNB2P17787 502 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 ETFBP38117 255 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 PTPN9P43378 593 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 RECQLP46063 649 aaPredicted RBP11.35□□□□□ -0.59
CCDC47-206ENST00000584112 GSCP56915 257 aaPredicted RBP11.35□□□□□ -0.59
CCDC47-206ENST00000584112 NRG1Q02297 640 aaPredicted RBP11.35□□□□□ -0.59
CCDC47-206ENST00000584112 SLC20A2Q08357 652 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 ILKQ13418 452 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 CDO1Q16878 200 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 C3orf38Q5JPI3 329 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 AGBL4Q5VU57 503 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 NAPEPLDQ6IQ20 393 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 RETSATQ6NUM9 610 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 STRADAQ7RTN6 431 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 TRIM69Q86WT6 500 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 OXR1Q8N573 874 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 EMC1Q8N766 993 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 ERGIC2Q96RQ1 377 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 PSMB7Q99436 277 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 ELF4Q99607 663 aaPredicted RBP11.35□□□□□ -0.59
CCDC47-206ENST00000584112 EBF2Q9HAK2 575 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 PREBQ9HCU5 417 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 DYRK4Q9NR20 520 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 GDF3Q9NR23 364 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 PPARGC1AQ9UBK2 798 aaKnown RBP11.35□□□□□ -0.59
CCDC47-206ENST00000584112 DKK3Q9UBP4 350 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 SARDHQ9UL12 918 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 ATXN7L1Q9ULK2 861 aaPredicted RBP11.35□□□□□ -0.59
CCDC47-206ENST00000584112 SATB2Q9UPW6 733 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 DMTF1Q9Y222 760 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 SNX10Q9Y5X0 201 aa11.35□□□□□ -0.59
CCDC47-206ENST00000584112 TACC2O95359 2948 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 A0A0D9SEW6 157 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 CXorf51AA0A1B0GTR3 108 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 LRRC10BA6NIK2 292 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 C2CD4BA6NLJ0 364 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 SNAP91O60641 907 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 CSO75390 466 aaKnown RBP11.34□□□□□ -0.59
CCDC47-206ENST00000584112 GJB6O95452 261 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 MT-CO1P00395 513 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 CALB1P05937 261 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 CCDC172P0C7W6 258 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 KRT3P12035 628 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 UNGP13051 313 aaPredicted RBP11.34□□□□□ -0.59
CCDC47-206ENST00000584112 RRM1P23921 792 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 CHRNA3P32297 505 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 CD97P48960 835 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 ARRB1P49407 418 aaPredicted RBP11.34□□□□□ -0.59
CCDC47-206ENST00000584112 PPP2CBP62714 309 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 PPP2CAP67775 309 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 CNTN1Q12860 1018 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 OVGP1Q12889 678 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 SETMARQ53H47 684 aaPredicted RBP11.34□□□□□ -0.59
CCDC47-206ENST00000584112 NEK5Q6P3R8 708 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 C22orf39Q6P5X5 142 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 IQCHQ86VS3 1027 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 MFSD2AQ8NA29 543 aa11.34□□□□□ -0.59
CCDC47-206ENST00000584112 TMIEQ8NEW7 156 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms