RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 SNX10Q9Y5X0 201 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 RP1P56715 2156 aa12.51□□□□□ -0.41
TOP3A-215ENST00000583328 TRPM6Q9BX84 2022 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 KIF26BQ2KJY2 2108 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 DRGXA6NNA5 263 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 AGRPO00253 132 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 BIN1O00499 593 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 NVLO15381 856 aaKnown RBP12.5□□□□□ -0.41
TOP3A-215ENST00000583328 ZNF821O75541 412 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-215ENST00000583328 RPLP0P05388 317 aaKnown RBP12.5□□□□□ -0.41
TOP3A-215ENST00000583328 CCNHP51946 323 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-215ENST00000583328 YPEL5P62699 121 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 TLE1Q04724 770 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 STIM1Q13586 685 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 BRMS1LQ5PSV4 323 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 C11orf57Q6ZUT1 292 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-215ENST00000583328 VASH2Q86V25 355 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 VPS36Q86VN1 386 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 FSTL5Q8N475 847 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-215ENST00000583328 RYBPQ8N488 228 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-215ENST00000583328 ARL10Q8N8L6 244 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 RAB7BQ96AH8 199 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 CENPTQ96BT3 561 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 CPXM1Q96SM3 734 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 CPEB1Q9BZB8 566 aaKnown RBP12.5□□□□□ -0.41
TOP3A-215ENST00000583328 SLC25A18Q9H1K4 315 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 ZDHHC6Q9H6R6 413 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 ACP6Q9NPH0 428 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 ARHGEF38Q9NXL2 777 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 HECAQ9UBI9 543 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-215ENST00000583328 RABGEF1Q9UJ41 708 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 PNMA8BQ9ULN7 279 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-215ENST00000583328 ITM2BQ9Y287 266 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 FCF1Q9Y324 198 aaKnown RBP12.5□□□□□ -0.41
TOP3A-215ENST00000583328 LOXL2Q9Y4K0 774 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 PCDHGA4Q9Y5G9 962 aa12.5□□□□□ -0.41
TOP3A-215ENST00000583328 NYNRINQ9P2P1 1898 aaKnown RBP12.5□□□□□ -0.41
TOP3A-215ENST00000583328 ILVBLA1L0T0 632 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 C16orf96A6NNT2 1141 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 D6RAR5 112 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 DAB1O75553 588 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 CELA2BP08218 269 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-215ENST00000583328 CTSEP14091 401 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 BMP6P22004 513 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 CCKBRP32239 447 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 EIF4A3P38919 411 aaKnown RBP12.49□□□□□ -0.41
TOP3A-215ENST00000583328 USP8P40818 1118 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 ABL2P42684 1182 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 SERPINH1P50454 418 aaKnown RBP12.49□□□□□ -0.41
TOP3A-215ENST00000583328 BLKP51451 505 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 CYP4F2P78329 520 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 C1QBPQ07021 282 aaKnown RBP12.49□□□□□ -0.41
TOP3A-215ENST00000583328 UBAP2LQ14157 1087 aaKnown RBP12.49□□□□□ -0.41
TOP3A-215ENST00000583328 ELOCQ15369 112 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 TCEA2Q15560 299 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 SKOR2Q2VWA4 1001 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-215ENST00000583328 ISM2Q6H9L7 571 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 LVRNQ6Q4G3 990 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 MACC1Q6ZN28 852 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 FAM183BPQ6ZVS7 135 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 ZFAND4Q86XD8 727 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 PASD1Q8IV76 773 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 ZNF683Q8IZ20 524 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 WDTC1Q8N5D0 677 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 KYQ8NBH2 561 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 TM6SF2Q9BZW4 377 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 INTS2Q9H0H0 1204 aaKnown RBP12.49□□□□□ -0.41
TOP3A-215ENST00000583328 LRRN3Q9H3W5 708 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 ATP13A1Q9HD20 1204 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 ANLNQ9NQW6 1124 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 PIGVQ9NUD9 493 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 GEMIN8Q9NWZ8 242 aaKnown RBP12.49□□□□□ -0.41
TOP3A-215ENST00000583328 TMEM63CQ9P1W3 806 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 GGT7Q9UJ14 662 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 GPR34Q9UPC5 381 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 DOPEY2Q9Y3R5 2298 aa12.49□□□□□ -0.41
TOP3A-215ENST00000583328 PRAMEF33A0A0G2JMD5 474 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 A0A1W2PQM1 296 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 TOR1BO14657 336 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 PSMA7O14818 248 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 PRAMEF10O60809 474 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 MMP20O60882 483 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 SRGAP2O75044 1071 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 ZMPSTE24O75844 475 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 ALPIP09923 528 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 ITIH1P19827 911 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 GKP32189 559 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 IGFALSP35858 605 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 MAPK10P53779 464 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 SNX16P57768 344 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 RNASE9P60153 205 aaKnown RBP12.48□□□□□ -0.41
TOP3A-215ENST00000583328 SLC6A3Q01959 620 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 DEUP1Q05D60 604 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 ZNF805Q5CZA5 627 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 CAVIN1Q6NZI2 390 aaKnown RBP12.48□□□□□ -0.41
TOP3A-215ENST00000583328 OLFML1Q6UWY5 402 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 ZNF783Q6ZMS7 281 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 GKN2Q86XP6 184 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 HID1Q8IV36 788 aa12.48□□□□□ -0.41
TOP3A-215ENST00000583328 Q8N9G6 341 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms