RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 FZD3Q9NPG1 666 aa5.89□□□□□ -1.47
SMARCE1-219ENST00000583294 ELOVL5Q9NYP7 299 aa5.89□□□□□ -1.47
SMARCE1-219ENST00000583294 KDM3AQ9Y4C1 1321 aa5.89□□□□□ -1.47
SMARCE1-219ENST00000583294 CBY3A6NI87 242 aa5.88□□□□□ -1.47
SMARCE1-219ENST00000583294 IFNA2P01563 188 aa5.88□□□□□ -1.47
SMARCE1-219ENST00000583294 GPR12P47775 334 aa5.88□□□□□ -1.47
SMARCE1-219ENST00000583294 CENPAP49450 140 aa5.88□□□□□ -1.47
SMARCE1-219ENST00000583294 CLDN2P57739 230 aa5.88□□□□□ -1.47
SMARCE1-219ENST00000583294 PTGR1Q14914 329 aa5.88□□□□□ -1.47
SMARCE1-219ENST00000583294 ODF3L2Q3SX64 289 aa5.88□□□□□ -1.47
SMARCE1-219ENST00000583294 WASHC2DQ5SRD0 308 aa5.88□□□□□ -1.47
SMARCE1-219ENST00000583294 GPATCH4Q5T3I0 446 aaKnown RBP5.88□□□□□ -1.47
SMARCE1-219ENST00000583294 TRAPPC11Q7Z392 1133 aa5.88□□□□□ -1.47
SMARCE1-219ENST00000583294 TBC1D26Q86UD7 250 aa5.88□□□□□ -1.47
SMARCE1-219ENST00000583294 RNF183Q96D59 192 aa5.88□□□□□ -1.47
SMARCE1-219ENST00000583294 ZNF70Q9UC06 446 aaPredicted RBP5.88□□□□□ -1.47
SMARCE1-219ENST00000583294 IGLV5-39A0A0G2JS06 123 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 A0A1W2PQM1 296 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 NPIPB15A6NHN6 443 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 H0YGN5 161 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 PPEF2O14830 753 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 TGFB1I1O43294 461 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 BAIAP3O94812 1187 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 TMEM63AO94886 807 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 SEC31AO94979 1220 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 SYF2O95926 243 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 SPARCP09486 303 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 HSPA1AP0DMV8 641 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 HSPA1BP0DMV9 641 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 ENO3P13929 434 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 CHRNB2P17787 502 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 CAPN3P20807 821 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 ICAM3P32942 547 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 RXRGP48443 463 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 CDH12P55289 794 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 PPP2R5BQ15173 497 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 PRTGQ2VWP7 1150 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 ATG9BQ674R7 924 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 LRRC8EQ6NSJ5 796 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 TMTC3Q6ZXV5 915 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 SLC46A3Q7Z3Q1 461 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 CTU1Q7Z7A3 348 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 TDRPQ86YL5 185 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 ANKRD52Q8NB46 1076 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 ENGASEQ8NFI3 743 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 CADM4Q8NFZ8 388 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 ZC3HAV1LQ96H79 300 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 NLRP4Q96MN2 994 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 ZNF778Q96MU6 729 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 BBS4Q96RK4 519 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 PIP5K1AQ99755 562 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 GLIS2Q9BZE0 524 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 NPFFR1Q9GZQ6 430 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 ISCUQ9H1K1 167 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 ZBTB40Q9NUA8 1239 aa5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 SPATS2LQ9NUQ6 558 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-219ENST00000583294 COL3A1P02461 1466 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 ITIH6Q6UXX5 1313 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 A0A087X0M5 115 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 LY6G6EA0A0G2JKS1 128 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 A0A1B0GX30 115 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 EBAG9O00559 213 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 KLKB1P03952 638 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 HEXAP06865 529 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 MMP3P08254 477 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 TFPIP10646 304 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 ZNF8P17098 575 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 PTPN2P17706 415 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 TNFRSF1BP20333 461 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 TTKP33981 857 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 RYKP34925 604 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 CPOXP36551 454 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 POLD2P49005 469 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 PLCD1P51178 756 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 ZNF81P51508 661 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 EIF3BP55884 814 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 RPS3AP61247 264 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 PPATQ06203 517 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 SRSF1Q07955 248 aaKnown RBP eCLIP5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 Q5PR19 223 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 ZKSCAN2Q63HK3 967 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 PARM1Q6UWI2 310 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 COLCA1Q6ZS62 124 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 DHX40Q8IX18 779 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 MCPH1Q8NEM0 835 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 ZMIZ2Q8NF64 920 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 LPAR1Q92633 364 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 SIN3AQ96ST3 1273 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 RANBP17Q9H2T7 1088 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 KLHL31Q9H511 634 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 KRT84Q9NSB2 600 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 SIRT3Q9NTG7 399 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 POT1Q9NUX5 634 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 A4GNTQ9UNA3 340 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 PIAS3Q9Y6X2 628 aa5.86□□□□□ -1.47
SMARCE1-219ENST00000583294 PGPEP1LA6NFU8 196 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 HSPB2A8KAH6 182 aa5.85□□□□□ -1.47
SMARCE1-219ENST00000583294 KLRF2D3W0D1 207 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms