RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 SLC9C2Q5TAH2 1124 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 MON1BQ7L1V2 547 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 FAM160B2Q86V87 743 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 GLCCI1Q86VQ1 547 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 CERS3Q8IU89 383 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 PLD5Q8N7P1 536 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 RNF125Q96EQ8 232 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 WACQ9BTA9 647 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 CDT1Q9H211 546 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 PLK2Q9NYY3 685 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 FZD10Q9ULW2 581 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 ARHGAP26Q9UNA1 814 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 A0A1B0GVC2 190 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 GAGE10A6NGK3 116 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 INAFM1C9JVW0 142 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 VWA5AO00534 786 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 TSPAN4O14817 238 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 SLC2A4P14672 509 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 ZNF8P17098 575 aaPredicted RBP4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 HOXD3P31249 432 aaPredicted RBP4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 DCTDP32321 178 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 MLH1P40692 756 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 CDKN2AP42771 156 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 PAFAH1B1P43034 410 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 CLCN5P51795 746 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 GPS2Q13227 327 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 RUNX2Q13950 521 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 LPIN1Q14693 890 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 BAK1Q16611 211 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 ZNF284Q2VY69 593 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 CES5AQ6NT32 575 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 MMS22LQ6ZRQ5 1243 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 PATL1Q86TB9 770 aaKnown RBP4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 TADA2BQ86TJ2 420 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 DENND6AQ8IWF6 608 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 ST8SIA4Q92187 359 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 MPHOSPH8Q99549 860 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 DCLK3Q9C098 648 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 VEZTQ9HBM0 779 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 SNTG1Q9NSN8 517 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 PPP1R14DQ9NXH3 145 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 SLC25A10Q9UBX3 287 aaPredicted RBP4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 PGAP2Q9UHJ9 254 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 RAI2Q9Y5P3 530 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 TTC3P53804 2025 aa4.78□□□□□ -1.64
SMCHD1-204ENST00000581226 A6NLC8 198 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 KDM4EB2RXH2 506 aaPredicted RBP4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 CHL1O00533 1208 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 EBAG9O00559 213 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 ASAP2O43150 1006 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 ITM2AO43736 263 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 ATP2C2O75185 946 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 GALTP07902 379 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 TFPIP10646 304 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 NAGAP17050 411 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 PTPN2P17706 415 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 HOXA11P31270 313 aaPredicted RBP4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 FMO4P31512 558 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 HTR6P50406 440 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 KRTAP10-11P60412 298 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 UFM1P61960 85 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 FAM27E3Q08E93 113 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 HNF4GQ14541 408 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 TAF11Q15544 211 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 SERTAD4-AS1Q5TG53 156 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 TMEM81Q6P7N7 255 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 RRM2BQ7LG56 351 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 TBC1D26Q86UD7 250 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 GPAT4Q86UL3 456 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 PRR26Q8N8Z3 221 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 MIGA1Q8NAN2 632 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 C11orf65Q8NCR3 313 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 IL17REQ8NFR9 667 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 GPT2Q8TD30 523 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 KIF1BPQ96EK5 621 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 MSTO1Q9BUK6 570 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 KIAA1456Q9P272 454 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 IL36RNQ9UBH0 155 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 MYO6Q9UM54 1294 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 PCDHA7Q9UN72 937 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 CYP46A1Q9Y6A2 500 aa4.77□□□□□ -1.65
SMCHD1-204ENST00000581226 TEX13CA0A0J9YWL9 993 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 CBY3A6NI87 242 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 FAM90A8PA6NJQ4 464 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 FAM90A13PP0C7W8 464 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 FAM90A24PP0C7X0 464 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 CBSLP0DN79 551 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 COX7A2P14406 83 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 RYKP34925 604 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 CBSP35520 551 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 ABATP80404 500 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 VEPH1Q14D04 833 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 DCAF6Q58WW2 860 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 FAM69AQ5T7M9 428 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 TRILQ7L0X0 811 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 ZDHHC17Q8IUH5 632 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 KIAA2013Q8IYS2 634 aa4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 SAMD14Q8IZD0 417 aaPredicted RBP4.76□□□□□ -1.65
SMCHD1-204ENST00000581226 FBXL14Q8N1E6 418 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 315.2 ms