RNA–Protein interactions for RNA: ENST00000581045.1

CDC42EP4-207, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-207ENST00000581045 BBS12Q6ZW61 710 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 PARS2Q7L3T8 475 aaKnown RBP13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 CYP2U1Q7Z449 544 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 SRLQ86TD4 932 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 LRRC49Q8IUZ0 686 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 SLC41A1Q8IVJ1 513 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 REXO1L1PQ8IX06 675 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 PLPP6Q8IY26 295 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 RGL4Q8IZJ4 473 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 TRIM58Q8NG06 486 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 ZNF419Q96HQ0 510 aaPredicted RBP13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 ZC3H10Q96K80 434 aaKnown RBP13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 PSKH2Q96QS6 385 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 ARRDC1-AS1Q9H2J1 176 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 SEMA4AQ9H3S1 761 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 SGK2Q9HBY8 427 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 SCUBE2Q9NQ36 999 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 RBM22Q9NW64 420 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 FZD4Q9ULV1 537 aa13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDC42EP4-207ENST00000581045 ADAMTS9Q9P2N4 1935 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 TBC1D3DA0A087WVF3 549 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 TBC1D3IA0A087WXS9 549 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 TBC1D3EA0A087X179 549 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 TBC1D3KA0A087X1G2 549 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 TBC1D3FA6NER0 549 aaPredicted RBP13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 TBC1D3LB9A6J9 549 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 PROB1E7EW31 1015 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 H7C0C1 242 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 KCNK3O14649 394 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 GFRA3O60609 400 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 JCHAINP01591 159 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 HLA-DQB2P05538 268 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 TBC1D3HP0C7X1 549 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 ITPKAP23677 461 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 ITGB7P26010 798 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 MAOBP27338 520 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 ATP5OP48047 213 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 NR2C2P49116 596 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 RENBPP51606 427 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 NEK3P51956 506 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 OTUD4Q01804 1114 aaKnown RBP13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 ZNF33AQ06730 810 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 PPIDQ08752 370 aaKnown RBP13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 ZBTB17Q13105 803 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 ZNF805Q5CZA5 627 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 ZNF569Q5MCW4 686 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 PIP5KL1Q5T9C9 394 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 LYSMD4Q5XG99 296 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 TBC1D3GQ6DHY5 549 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 TBC1D3CQ6IPX1 549 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 FBXL19Q6PCT2 694 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 ERN2Q76MJ5 926 aaKnown RBP13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 ADAT2Q7Z6V5 191 aaKnown RBP13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 CAMK1DQ8IU85 385 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 TBC1D3Q8IZP1 549 aaPredicted RBP13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 DCLK2Q8N568 766 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 PDCD6IPQ8WUM4 868 aaKnown RBP13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 TFB1MQ8WVM0 346 aaKnown RBP13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 PIGKQ92643 395 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 OLFM3Q96PB7 478 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 TSGA13Q96PP4 275 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 OSBPL1AQ9BXW6 950 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 MIR1-1HGQ9H1L0 117 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 SMOC1Q9H4F8 434 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 C10orf88Q9H8K7 445 aa13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 TP53BP1Q12888 1972 aaPredicted RBP13.21□□□□□ -0.29
CDC42EP4-207ENST00000581045 LRRC72A6NJI9 287 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 C16orf96A6NNT2 1141 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 APOC4-APOC2K7ER74 178 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 ENC1O14682 589 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 TJP3O95049 919 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 APOC2P02655 101 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 ADRB3P13945 408 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 SERPINA4P29622 427 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 MAT2AP31153 395 aaKnown RBP13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 CXCR5P32302 372 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 PTPN7P35236 360 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 PLA2G5P39877 138 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 DSC2Q02487 901 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 BCL2L1Q07817 233 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 SPEM2Q0P670 501 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 HNRNPDQ14103 355 aaKnown RBP13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 BZW1Q7L1Q6 419 aaKnown RBP13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 OR2T34Q8NGX1 318 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 MAML1Q92585 1016 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 LRIG1Q96JA1 1093 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 NSMCE3Q96MG7 304 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 AGAP3Q96P47 875 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 SEMA3CQ99985 751 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 MGME1Q9BQP7 344 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 ATP13A3Q9H7F0 1226 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 NOD2Q9HC29 1040 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 ITM2BQ9Y287 266 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 LRRK1Q38SD2 2015 aa13.2□□□□□ -0.3
CDC42EP4-207ENST00000581045 TCRBV7S2A1N4TA0A589 114 aa13.19□□□□□ -0.3
CDC42EP4-207ENST00000581045 GOLGA6L9A6NEM1 432 aa13.19□□□□□ -0.3
CDC42EP4-207ENST00000581045 F5H423 210 aaPredicted RBP13.19□□□□□ -0.3
CDC42EP4-207ENST00000581045 NEMP1O14524 444 aa13.19□□□□□ -0.3
CDC42EP4-207ENST00000581045 PLRG1O43660 514 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms