RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 UGT1A9O60656 530 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 C1RP00736 705 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 NDST2P52849 883 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 ITKQ08881 620 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 SEMA5AQ13591 1074 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 IHHQ14623 411 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 RAB30Q15771 203 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 PDK4Q16654 411 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 PARP6Q2NL67 630 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 TRMT10BQ6PF06 316 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 C4orf22Q6V702 233 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 SLC26A11Q86WA9 606 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 AGAP11Q8TF27 550 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 UGT1A7Q9HAW7 530 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 UGT1A10Q9HAW8 530 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 UGT1A8Q9HAW9 530 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 RAD54BQ9Y620 910 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 NOTCH4Q99466 2003 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 SNAP91O60641 907 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 SKAP2O75563 359 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 ANP32DO95626 131 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 VIPR2P41587 438 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 CDH4P55283 916 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 GNA12Q03113 381 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 ZNF177Q13360 481 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 SERINC3Q13530 473 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 TCEAL5Q5H9L2 206 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 RABGAP1LQ5R372 815 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 RNF219Q5W0B1 726 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 CXorf57Q6NSI4 855 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 TDRD5Q8NAT2 981 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 MZB1Q8WU39 189 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 TTC17Q96AE7 1141 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 FAM111AQ96PZ2 611 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 TASP1Q9H6P5 420 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 SP110Q9HB58 689 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 TDP1Q9NUW8 608 aa12.86□□□□□ -0.35
CDK5RAP3-217ENST00000580287 H0Y626 953 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 CBX4O00257 560 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 MUSKO15146 869 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 KRT37O76014 449 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 HNRNPA1P09651 372 aaKnown RBP eCLIP12.85□□□□□ -0.358e-6■□□□□ 10.1
CDK5RAP3-217ENST00000580287 TPH1P17752 444 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 TPSB2P20231 275 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 KCNC3Q14003 757 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 TPSAB1Q15661 275 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 C5orf22Q49AR2 442 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 PDE12Q6L8Q7 609 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 OTOAQ7RTW8 1153 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 TMEM25Q86YD3 366 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 PGBD5Q8N414 524 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 BANPQ8N9N5 519 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 MCUQ8NE86 351 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 OR52K1Q8NGK4 314 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 UTP4Q969X6 686 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 EXOC2Q96KP1 924 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 EBNA1BP2Q99848 306 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 SLC13A1Q9BZW2 595 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 XAB2Q9HCS7 855 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 ZDHHC7Q9NXF8 308 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 VCANP13611 3396 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 TOP3BO95985 862 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 RHOCP08134 193 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 HOXD9P28356 352 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 HOXA9P31269 272 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 SLC18A1P54219 525 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 DLX2Q07687 328 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 HYAL1Q12794 435 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 SKIV2LQ15477 1246 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 TTC39BQ5VTQ0 682 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 CES3Q6UWW8 571 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 HTR3DQ70Z44 454 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 UNC5BQ8IZJ1 945 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 GSDMBQ8TAX9 411 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 MYLIPQ8WY64 445 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 ZNF75CPQ92670 426 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 AZIN2Q96A70 460 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 ALKBH8Q96BT7 664 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 PRR11Q96HE9 360 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 SIGLEC10Q96LC7 697 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 BRD8Q9H0E9 1235 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 MUC3BQ9H195 1237 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 SMYD2Q9NRG4 433 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 IGSF9Q9P2J2 1179 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 STOML2Q9UJZ1 356 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 LSM7Q9UK45 103 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 WNT6Q9Y6F9 365 aa12.85□□□□□ -0.35
CDK5RAP3-217ENST00000580287 A0A1B0GVM2 712 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 CCDC78A2IDD5 438 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 TCAF2A6NFQ2 919 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 TRIM24O15164 1050 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 PMPCBO75439 489 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 CLDN11O75508 207 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 ALADP13716 330 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 FDFT1P37268 417 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 MAGEA6P43360 314 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 PCSK7Q16549 785 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 MROH9Q5TGP6 573 aa12.84□□□□□ -0.35
CDK5RAP3-217ENST00000580287 MARC1Q5VT66 337 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms