RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 NT5C3BQ969T7 300 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 TSACCQ96A04 125 aaPredicted RBP3.91□□□□□ -1.78
NUP85-209ENST00000578987 ATXN7L3BQ96GX2 97 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 PRR11Q96HE9 360 aaPredicted RBP3.91□□□□□ -1.78
NUP85-209ENST00000578987 KLHL32Q96NJ5 620 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 KLF6Q99612 283 aaPredicted RBP3.91□□□□□ -1.78
NUP85-209ENST00000578987 HEPHQ9BQS7 1158 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 WRAP53Q9BUR4 548 aaKnown RBP3.91□□□□□ -1.78
NUP85-209ENST00000578987 TRIM62Q9BVG3 475 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 HDAC8Q9BY41 377 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 KLC2Q9H0B6 622 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 NUP62CLQ9H1M0 184 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 VPS16Q9H269 839 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 SYNDIG1Q9H7V2 258 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 ATP13A1Q9HD20 1204 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 METTL5Q9NRN9 209 aaKnown RBP3.91□□□□□ -1.78
NUP85-209ENST00000578987 SAMSN1Q9NSI8 373 aaKnown RBP3.91□□□□□ -1.78
NUP85-209ENST00000578987 ASNSD1Q9NWL6 643 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 NLGN3Q9NZ94 848 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 SIRPGQ9P1W8 387 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 GULP1Q9UBP9 304 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 RWDD2AQ9UIY3 292 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 TMEM59LQ9UK28 342 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 ENTPD2Q9Y5L3 495 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 FHOD1Q9Y613 1164 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 ADGRG1Q9Y653 693 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 IGSF10Q6WRI0 2623 aa3.91□□□□□ -1.78
NUP85-209ENST00000578987 SDK2Q58EX2 2172 aa3.9□□□□□ -1.78
NUP85-209ENST00000578987 IGLV3-10A0A075B6K4 115 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 TLDC2A0PJX2 215 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 ILVBLA1L0T0 632 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 GTPBP10A4D1E9 387 aaKnown RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 NEMP2A6NFY4 417 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 A8MX80 341 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 FPGTO14772 594 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 YY2O15391 372 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 EFSO43281 561 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 AQP9O43315 295 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 MAP3K7O43318 606 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 BUB1O43683 1085 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 LZTS3O60299 673 aaPredicted RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 GFPT2O94808 682 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 PIGNO95427 931 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 F9P00740 461 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 CSF2P04141 144 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 PRKCGP05129 697 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 UGT2B4P06133 528 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 ALPPL2P10696 532 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 CYP11B1P15538 503 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 TIMP2P16035 220 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 CHRNB2P17787 502 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 ITGB7P26010 798 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 CDH5P33151 784 aaPredicted RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 ADRA1BP35368 520 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 IGFALSP35858 605 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 NUDT1P36639 197 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 EIF4A3P38919 411 aaKnown RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 LSSP48449 732 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 SERPINH1P50454 418 aaKnown RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 CCNHP51946 323 aaPredicted RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 NEK3P51956 506 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 PCBP4P57723 403 aaKnown RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 SNX16P57768 344 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 HNRNPKP61978 463 aaKnown RBP eCLIP3.9□□□□□ -1.79
NUP85-209ENST00000578987 CCL7P80098 99 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 NFKB2Q00653 900 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 CCDC15Q0P6D6 951 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 SRSF6Q13247 344 aaKnown RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 TGIF1Q15583 401 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 MEA1Q16626 185 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 MAN2A1Q16706 1144 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 ISXQ2M1V0 245 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 MYLK3Q32MK0 819 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 ZSCAN23Q3MJ62 389 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 CCDC14Q49A88 953 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 VWA3BQ502W6 1294 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 ZNF805Q5CZA5 627 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 PRRT3Q5FWE3 981 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 CCDC183Q5T5S1 534 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 KLHDC7AQ5VTJ3 777 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 BROXQ5VW32 411 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 NAA35Q5VZE5 725 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 SCYL2Q6P3W7 929 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 SASS6Q6UVJ0 657 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 ENPP7Q6UWV6 458 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 GDPD4Q6W3E5 623 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 SETD3Q86TU7 594 aaPredicted RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 VPS36Q86VN1 386 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 ZNF354CQ86Y25 554 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 DNAAF5Q86Y56 855 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 DCP2Q8IU60 420 aaKnown RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 SFTPA2Q8IWL1 248 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 PHACTR4Q8IZ21 702 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 CACTIN-AS1Q8N1I8 211 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 PYROXD2Q8N2H3 581 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 PCDH20Q8N6Y1 951 aaKnown RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 CCDC185Q8N715 623 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 Q8N9G6 341 aaPredicted RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 FAM181AQ8N9Y4 354 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 DCAF4L2Q8NA75 395 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms