RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 GRK4P32298 578 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 LEPRP48357 1165 aaKnown RBP8.35□□□□□ -1.07
SKA2-203ENST00000578105 SLC11A2P49281 568 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 SLC12A2P55011 1212 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 CDH4P55283 916 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 WNT3AP56704 352 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 DNAJB13P59910 316 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 ACVR1Q04771 509 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 NSUN2Q08J23 767 aaKnown RBP eCLIP8.35□□□□□ -1.07
SKA2-203ENST00000578105 SF3A3Q12874 501 aaKnown RBP eCLIP8.35□□□□□ -1.07
SKA2-203ENST00000578105 PRKAA1Q13131 559 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 SERINC3Q13530 473 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 USP10Q14694 798 aaKnown RBP8.35□□□□□ -1.07
SKA2-203ENST00000578105 POLD3Q15054 466 aaPredicted RBP8.35□□□□□ -1.07
SKA2-203ENST00000578105 TRMT5Q32P41 509 aaKnown RBP8.35□□□□□ -1.07
SKA2-203ENST00000578105 RALGPS1Q5JS13 557 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 CFAP157Q5JU67 520 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 RABGAP1LQ5R372 815 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 TSTD2Q5T7W7 516 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 AGAP9Q5VTM2 703 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 TPGS2Q68CL5 300 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 SLC8B1Q6J4K2 584 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 KLC3Q6P597 504 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 RAPH1Q70E73 1250 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 CHST9Q7L1S5 443 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 PIWIL4Q7Z3Z4 852 aaKnown RBP8.35□□□□□ -1.07
SKA2-203ENST00000578105 C10orf107Q8IVU9 208 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 MFN1Q8IWA4 741 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 FAM126BQ8IXS8 530 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 CRIPAKQ8N1N5 446 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 KIF2BQ8N4N8 673 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 TEX9Q8N6V9 391 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 FAM13CQ8NE31 585 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 IPMKQ8NFU5 416 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 AGAP11Q8TF27 550 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 STYXQ8WUJ0 223 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 UTP4Q969X6 686 aaKnown RBP8.35□□□□□ -1.07
SKA2-203ENST00000578105 THOC1Q96FV9 657 aaKnown RBP8.35□□□□□ -1.07
SKA2-203ENST00000578105 RSRC1Q96IZ7 334 aaKnown RBP8.35□□□□□ -1.07
SKA2-203ENST00000578105 ASB2Q96Q27 587 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 ZIC5Q96T25 663 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 MRPL57Q9BQC6 102 aaKnown RBP8.35□□□□□ -1.07
SKA2-203ENST00000578105 TRMOQ9BU70 441 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 CCDC28BQ9BUN5 200 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 MECRQ9BV79 373 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 CCDC106Q9BWC9 280 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 C1QTNF1Q9BXJ1 281 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 NMUR2Q9GZQ4 415 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 DRC3Q9H069 523 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 CDH19Q9H159 772 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 MRPL46Q9H2W6 279 aaKnown RBP8.35□□□□□ -1.07
SKA2-203ENST00000578105 C12orf65Q9H3J6 166 aaKnown RBP8.35□□□□□ -1.07
SKA2-203ENST00000578105 MFSD1Q9H3U5 465 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 GPBP1L1Q9HC44 474 aaPredicted RBP8.35□□□□□ -1.07
SKA2-203ENST00000578105 NDE1Q9NXR1 346 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 SAGE1Q9NXZ1 904 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 GMIPQ9P107 970 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 STOML1Q9UBI4 398 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 DNMT3LQ9UJW3 386 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 DNAJC16Q9Y2G8 782 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 PRG3Q9Y2Y8 225 aaPredicted RBP8.35□□□□□ -1.07
SKA2-203ENST00000578105 NR2E3Q9Y5X4 410 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 DOCK4Q8N1I0 1966 aa8.35□□□□□ -1.07
SKA2-203ENST00000578105 CXorf51AA0A1B0GTR3 108 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 LOC285095A0A1B0GVY8 99 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 FAM95CA0A1B0GW59 222 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 SLC38A8A6NNN8 435 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 G3V2L1 256 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 PFDN6O15212 129 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 MSI1O43347 362 aaKnown RBP8.34□□□□□ -1.07
SKA2-203ENST00000578105 PRAMEF11O60813 436 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 FKTNO75072 461 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 CLDN11O75508 207 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 CIB2O75838 187 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 HSPA4LO95757 839 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 EFEMP2O95967 443 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 MOCS2O96007 188 aaPredicted RBP8.34□□□□□ -1.07
SKA2-203ENST00000578105 AHSGP02765 367 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 PRKCGP05129 697 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 GALTP07902 379 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 OR4Q2P0C623 313 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 OGNP20774 298 aaKnown RBP8.34□□□□□ -1.07
SKA2-203ENST00000578105 PSMA3P25788 255 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 RFC2P35250 354 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 ATP5C1P36542 298 aaKnown RBP8.34□□□□□ -1.07
SKA2-203ENST00000578105 GTF2A1P52655 376 aaPredicted RBP8.34□□□□□ -1.07
SKA2-203ENST00000578105 RABGGTBP53611 331 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 SATB1Q01826 763 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 EFEMP1Q12805 493 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 TAF10Q12962 218 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 MSLNQ13421 630 aaPredicted RBP8.34□□□□□ -1.07
SKA2-203ENST00000578105 RCN2Q14257 317 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 LBRQ14739 615 aaKnown RBP8.34□□□□□ -1.07
SKA2-203ENST00000578105 GRM3Q14832 879 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 DDR2Q16832 855 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 FAM83EQ2M2I3 478 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 USP41Q3LFD5 358 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 MGAT5BQ3V5L5 792 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 C10orf120Q5SQS8 335 aa8.34□□□□□ -1.07
SKA2-203ENST00000578105 FAM45BPQ6NSW5 357 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms