RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 CRYMQ14894 314 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 SLC1A5Q15758 541 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 CERCAMQ5T4B2 595 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 TRIM68Q6AZZ1 485 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 ASTLQ6HA08 431 aaPredicted RBP18.77■□□□□ 0.6
PRKCA-203ENST00000578063 AHI1Q8N157 1196 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 ASIC4Q96FT7 647 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 EXOC2Q96KP1 924 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 MYADMQ96S97 322 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 BCCIPQ9P287 314 aaKnown RBP eCLIP18.77■□□□□ 0.64e-8■■■□□ 14.8
PRKCA-203ENST00000578063 LGALS13Q9UHV8 139 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 SLC25A13Q9UJS0 675 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 FBXO10Q9UK96 956 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 SOX13Q9UN79 622 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 HS3ST2Q9Y278 367 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 FCF1Q9Y324 198 aaKnown RBP18.77■□□□□ 0.6
PRKCA-203ENST00000578063 ARIH1Q9Y4X5 557 aaPredicted RBP18.77■□□□□ 0.6
PRKCA-203ENST00000578063 MYO9BQ13459 2157 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 GJB3O75712 270 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 USP1O94782 785 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 ALDH1A2O94788 518 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 MT-CO1P00395 513 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 TPH1P17752 444 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 ATP5DP30049 168 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 FCHO2Q0JRZ9 810 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 PCID2Q5JVF3 399 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 KCTD16Q68DU8 428 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 TANGO2Q6ICL3 276 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 ZNF449Q6P9G9 518 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 KIAA0907Q7Z7F0 614 aaPredicted RBP18.77■□□□□ 0.59
PRKCA-203ENST00000578063 TMEM135Q86UB9 458 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 PPHLN1Q8NEY8 458 aaKnown RBP18.77■□□□□ 0.59
PRKCA-203ENST00000578063 MSLNLQ96KJ4 702 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 NECTIN4Q96NY8 510 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 FAM83CQ9BQN1 747 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 RPS6KL1Q9Y6S9 549 aa18.77■□□□□ 0.59
PRKCA-203ENST00000578063 POC1B-GALNT4F8VUJ3 575 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 FGF1P05230 155 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 CA4P22748 312 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 GBP2P32456 591 aaPredicted RBP18.76■□□□□ 0.59
PRKCA-203ENST00000578063 LTBRP36941 435 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 MAPK8P45983 427 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 AP1S1P61966 158 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 ADGRE1Q14246 886 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 FRG1Q14331 258 aaKnown RBP18.76■□□□□ 0.59
PRKCA-203ENST00000578063 KBTBD12Q3ZCT8 623 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 VITQ6UXI7 678 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 KDELC2Q7Z4H8 507 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 MFSD6LQ8IWD5 586 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 MICALL1Q8N3F8 863 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 SLC25A41Q8N5S1 370 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 TTC17Q96AE7 1141 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 TRIM56Q9BRZ2 755 aaKnown RBP18.76■□□□□ 0.59
PRKCA-203ENST00000578063 KIFC1Q9BW19 673 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 MRM3Q9HC36 420 aaKnown RBP18.76■□□□□ 0.59
PRKCA-203ENST00000578063 EURLQ9NYK6 297 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 MOCS1Q9NZB8 636 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 VPS18Q9P253 973 aa18.76■□□□□ 0.59
PRKCA-203ENST00000578063 PSMC3IPQ9P2W1 217 aaPredicted RBP18.76■□□□□ 0.59
PRKCA-203ENST00000578063 C1QAP02745 245 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 ATXN1LP0C7T5 689 aaKnown RBP18.75■□□□□ 0.59
PRKCA-203ENST00000578063 LAMP2P13473 410 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 ARSAP15289 507 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 GCAP28676 217 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 CHRNA4P43681 627 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 CSNK1DP48730 415 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 EFTUD2Q15029 972 aaKnown RBP eCLIP18.75■□□□□ 0.59
PRKCA-203ENST00000578063 TNFAIP8L3Q5GJ75 292 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 NCEH1Q6PIU2 408 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 NAT16Q8N8M0 369 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 WFIKKN2Q8TEU8 576 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 ISG20Q96AZ6 181 aaKnown RBP18.75■□□□□ 0.59
PRKCA-203ENST00000578063 ELSPBP1Q96BH3 223 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 ZNF669Q96BR6 464 aaPredicted RBP18.75■□□□□ 0.59
PRKCA-203ENST00000578063 TLCD1Q96CP7 247 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 RANBP9Q96S59 729 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 PAFAH2Q99487 392 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 DHRS4Q9BTZ2 278 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 TDRD1Q9BXT4 1180 aaKnown RBP18.75■□□□□ 0.59
PRKCA-203ENST00000578063 EBF3Q9H4W6 596 aa18.75■□□□□ 0.59
PRKCA-203ENST00000578063 PRRC2BQ5JSZ5 2229 aaKnown RBP18.75■□□□□ 0.59
PRKCA-203ENST00000578063 FAM159BA6NKW6 160 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 K7ERQ8 282 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 NDST3O95803 873 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 SRCP12931 536 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 ADRA1DP25100 572 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 MSH2P43246 934 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 DGKGP49619 791 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 ECT2LQ008S8 904 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 POU6F1Q14863 301 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 SIRPB2Q5JXA9 342 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 PKN3Q6P5Z2 889 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 ADIPOR2Q86V24 386 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 LRRC6Q86X45 466 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 RNF135Q8IUD6 432 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 YAF2Q8IY57 180 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 SH2D3CQ8N5H7 860 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.74■□□□□ 0.59
PRKCA-203ENST00000578063 SMRP1Q8NCR6 262 aa18.74■□□□□ 0.59
PRKCA-203ENST00000578063 CDKL2Q92772 493 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms