RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 POLR3BQ9NW08 1133 aaPredicted RBP12.54□□□□□ -0.4
RARA-208ENST00000577646 RBM22Q9NW64 420 aaKnown RBP eCLIP12.54□□□□□ -0.4
RARA-208ENST00000577646 FBXL12Q9NXK8 326 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 WSB2Q9NYS7 404 aaPredicted RBP12.54□□□□□ -0.4
RARA-208ENST00000577646 RAB23Q9ULC3 237 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 ATP8A1Q9Y2Q0 1164 aa12.54□□□□□ -0.4
RARA-208ENST00000577646 IGHV1OR15-9A0A0B4J2B8 117 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 LRRC72A6NJI9 287 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 INSIG1O15503 277 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 HRO43593 1189 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 AP1G1O43747 822 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 BNIP3LO60238 219 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 NDUFS2O75306 463 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 LEFTY1O75610 366 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 TCP1P17987 556 aaKnown RBP12.53□□□□□ -0.4
RARA-208ENST00000577646 PXNP49023 591 aaPredicted RBP12.53□□□□□ -0.4
RARA-208ENST00000577646 BCL2L1Q07817 233 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 ADCY2Q08462 1091 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 DMWDQ09019 674 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 ZNF211Q13398 564 aaPredicted RBP12.53□□□□□ -0.4
RARA-208ENST00000577646 SIM2Q14190 667 aaPredicted RBP12.53□□□□□ -0.4
RARA-208ENST00000577646 DCAF12L1Q5VU92 463 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 DRICH1Q6PGQ1 229 aaPredicted RBP12.53□□□□□ -0.4
RARA-208ENST00000577646 LEKR1Q6ZMV7 388 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 ERN2Q76MJ5 926 aaKnown RBP12.53□□□□□ -0.4
RARA-208ENST00000577646 CEP68Q76N32 757 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 LPCAT2Q7L5N7 544 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 NDUFAF2Q8N183 169 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 SLC35F6Q8N357 371 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 HDDC3Q8N4P3 179 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 ACTL9Q8TC94 416 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 HTR3CQ8WXA8 447 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 RUBCNQ92622 972 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 TM6SF2Q9BZW4 377 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 SUV39H2Q9H5I1 410 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 SCUBE2Q9NQ36 999 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 NCDNQ9UBB6 729 aa12.53□□□□□ -0.4
RARA-208ENST00000577646 PLXND1Q9Y4D7 1925 aa12.52□□□□□ -0.4
RARA-208ENST00000577646 TSPAN11A1L157 253 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 H7C0C1 242 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 KPNA3O00505 521 aaPredicted RBP12.52□□□□□ -0.41
RARA-208ENST00000577646 MID1O15344 667 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 RNASEH2AO75792 299 aaKnown RBP12.52□□□□□ -0.41
RARA-208ENST00000577646 JCHAINP01591 159 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 CTSLP07711 333 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 SERPINF2P08697 491 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 RBP3P10745 1247 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 PECAM1P16284 738 aaPredicted RBP12.52□□□□□ -0.41
RARA-208ENST00000577646 HOXD12P35452 270 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 ATP5OP48047 213 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 PSMD8P48556 350 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 NUMBP49757 651 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 SCNN1BP51168 640 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 CCR5P51681 352 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 NEK3P51956 506 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 EIF3EP60228 445 aaKnown RBP12.52□□□□□ -0.41
RARA-208ENST00000577646 RPL26P61254 145 aaKnown RBP12.52□□□□□ -0.41
RARA-208ENST00000577646 GNG11P61952 73 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 OTUD4Q01804 1114 aaKnown RBP12.52□□□□□ -0.41
RARA-208ENST00000577646 CCNG2Q16589 344 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 NCEH1Q6PIU2 408 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 NPNTQ6UXI9 565 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 RASGEF1CQ8N431 466 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 CHST14Q8NCH0 376 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 OR2T34Q8NGX1 318 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 GANCQ8TET4 914 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 ZNF419Q96HQ0 510 aaPredicted RBP12.52□□□□□ -0.41
RARA-208ENST00000577646 TEKT5Q96M29 485 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 TPSD1Q9BZJ3 242 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 SLC25A51Q9H1U9 297 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 ZDHHC6Q9H6R6 413 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 PREBQ9HCU5 417 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 NT5MQ9NPB1 228 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 SAE1Q9UBE0 346 aaPredicted RBP12.52□□□□□ -0.41
RARA-208ENST00000577646 RNF14Q9UBS8 474 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 EVLQ9UI08 416 aaPredicted RBP12.52□□□□□ -0.41
RARA-208ENST00000577646 SARDHQ9UL12 918 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 SNX12Q9UMY4 172 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 RPL26L1Q9UNX3 145 aaKnown RBP12.52□□□□□ -0.41
RARA-208ENST00000577646 DRG1Q9Y295 367 aaKnown RBP12.52□□□□□ -0.41
RARA-208ENST00000577646 ACTL7AQ9Y615 435 aa12.52□□□□□ -0.41
RARA-208ENST00000577646 NYNRINQ9P2P1 1898 aaKnown RBP12.52□□□□□ -0.41
RARA-208ENST00000577646 FANCMQ8IYD8 2048 aa12.51□□□□□ -0.41
RARA-208ENST00000577646 CTAGE9A4FU28 777 aa12.51□□□□□ -0.41
RARA-208ENST00000577646 C16orf96A6NNT2 1141 aa12.51□□□□□ -0.41
RARA-208ENST00000577646 KCNK1O00180 336 aa12.51□□□□□ -0.41
RARA-208ENST00000577646 HTRA2O43464 458 aaPredicted RBP12.51□□□□□ -0.41
RARA-208ENST00000577646 TSPAN6O43657 245 aa12.51□□□□□ -0.41
RARA-208ENST00000577646 CEP104O60308 925 aa12.51□□□□□ -0.41
RARA-208ENST00000577646 FOXD2O60548 495 aaPredicted RBP12.51□□□□□ -0.41
RARA-208ENST00000577646 SEMA4FO95754 770 aa12.51□□□□□ -0.41
RARA-208ENST00000577646 DRD3P35462 400 aa12.51□□□□□ -0.41
RARA-208ENST00000577646 ELP6Q0PNE2 266 aa12.51□□□□□ -0.41
RARA-208ENST00000577646 PLK5Q496M5 336 aa12.51□□□□□ -0.41
RARA-208ENST00000577646 WDR45BQ5MNZ6 344 aa12.51□□□□□ -0.41
RARA-208ENST00000577646 SYCP2LQ5T4T6 812 aa12.51□□□□□ -0.41
RARA-208ENST00000577646 CFAP58Q5T655 872 aa12.51□□□□□ -0.41
RARA-208ENST00000577646 ATXN7L2Q5T6C5 722 aaPredicted RBP12.51□□□□□ -0.41
RARA-208ENST00000577646 PAPD7Q5XG87 772 aaKnown RBP12.51□□□□□ -0.41
RARA-208ENST00000577646 ITPRIPL1Q6GPH6 555 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms