RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 LRRC61Q9BV99 259 aa12.22□□□□□ -0.45
PRPF8-215ENST00000576958 RRN3Q9NYV6 651 aa12.22□□□□□ -0.45
PRPF8-215ENST00000576958 OR12D3Q9UGF7 316 aa12.22□□□□□ -0.45
PRPF8-215ENST00000576958 TPX2Q9ULW0 747 aaKnown RBP12.22□□□□□ -0.45
PRPF8-215ENST00000576958 FARP1Q9Y4F1 1045 aaPredicted RBP12.22□□□□□ -0.45
PRPF8-215ENST00000576958 ANKRD36A6QL64 1941 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 LRP4O75096 1905 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 PIEZO2Q9H5I5 2752 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 C2CD4BA6NLJ0 364 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 AQP9O43315 295 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 F9P00740 461 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 CYP1A1P04798 512 aaPredicted RBP12.21□□□□□ -0.45
PRPF8-215ENST00000576958 CDK4P11802 303 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 ACTN2P35609 894 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 SCNN1AP37088 669 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 ADKP55263 362 aaKnown RBP12.21□□□□□ -0.45
PRPF8-215ENST00000576958 PFN3P60673 137 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 E2F1Q01094 437 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 ISXQ2M1V0 245 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 KIAA1614Q5VZ46 1190 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 KIAA1161Q6NSJ0 714 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 RETSATQ6NUM9 610 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 GPR155Q7Z3F1 870 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 B3GNT8Q7Z7M8 397 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 ZSWIM9Q86XI8 627 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 CENPTQ96BT3 561 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 CCDC114Q96M63 670 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 PPP1R9BQ96SB3 815 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 CEP44Q9C0F1 390 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 VPS16Q9H269 839 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 NLRC4Q9NPP4 1024 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 SIRPGQ9P1W8 387 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 ENTPD2Q9Y5L3 495 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 HS3ST3A1Q9Y663 406 aa12.21□□□□□ -0.45
PRPF8-215ENST00000576958 AREL1O15033 823 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 KLK10O43240 276 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 TMCC1O94876 653 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 MMP8P22894 467 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 RFC1P35251 1148 aaPredicted RBP12.2□□□□□ -0.46
PRPF8-215ENST00000576958 POLR2FP61218 127 aaKnown RBP12.2□□□□□ -0.46
PRPF8-215ENST00000576958 HNRNPKP61978 463 aaKnown RBP eCLIP12.2□□□□□ -0.46
PRPF8-215ENST00000576958 C19orf57Q0VDD7 668 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 MYLK3Q32MK0 819 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 ZNF805Q5CZA5 627 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 PRRT3Q5FWE3 981 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 PHACTR4Q8IZ21 702 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 CACTIN-AS1Q8N1I8 211 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 FAM181AQ8N9Y4 354 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 TP53I13Q8NBR0 393 aaPredicted RBP12.2□□□□□ -0.46
PRPF8-215ENST00000576958 OR2AP1Q8NGE2 309 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 FAM172AQ8WUF8 416 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 HMCESQ96FZ2 354 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 PPP1R16AQ96I34 528 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 FEM1CQ96JP0 617 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 NSMCE3Q96MG7 304 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 DEPDC7Q96QD5 511 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 STK33Q9BYT3 514 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 SYNDIG1Q9H7V2 258 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 POLR1BQ9H9Y6 1135 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 FAM207AQ9NSI2 230 aaPredicted RBP12.2□□□□□ -0.46
PRPF8-215ENST00000576958 TMEM248Q9NWD8 314 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 GPATCH2LQ9NWQ4 482 aa12.2□□□□□ -0.46
PRPF8-215ENST00000576958 PPARGC1AQ9UBK2 798 aaKnown RBP12.2□□□□□ -0.46
PRPF8-215ENST00000576958 IPO11Q9UI26 975 aaKnown RBP12.2□□□□□ -0.46
PRPF8-215ENST00000576958 BOD1L1Q8NFC6 3051 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 NEMP1O14524 444 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 FPGTO14772 594 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 CCP110O43303 1012 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 AP1G1O43747 822 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 LSM8O95777 96 aaKnown RBP12.19□□□□□ -0.46
PRPF8-215ENST00000576958 PLEKP08567 350 aaPredicted RBP12.19□□□□□ -0.46
PRPF8-215ENST00000576958 HGFP14210 728 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 TIMP2P16035 220 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 TSHRP16473 764 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 RHOQP17081 205 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 RGRP47804 291 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 LSSP48449 732 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 JAM2P57087 298 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 PCBP4P57723 403 aaKnown RBP12.19□□□□□ -0.46
PRPF8-215ENST00000576958 BPIFB4P59827 614 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 CDR2Q01850 454 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 OGDHQ02218 1023 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 SGCGQ13326 291 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 IRF4Q15306 451 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 CYTH1Q15438 398 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 KLHL40Q2TBA0 621 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 TCP11X2Q5H9J9 407 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 ZCCHC8Q6NZY4 707 aaKnown RBP12.19□□□□□ -0.46
PRPF8-215ENST00000576958 ZNF783Q6ZMS7 281 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 KYQ8NBH2 561 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 TSACCQ96A04 125 aaPredicted RBP12.19□□□□□ -0.46
PRPF8-215ENST00000576958 EPAS1Q99814 870 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 BOCQ9BWV1 1114 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 ABCG4Q9H172 646 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 LHX3Q9UBR4 397 aa12.19□□□□□ -0.46
PRPF8-215ENST00000576958 APOBEC3BQ9UH17 382 aaKnown RBP12.19□□□□□ -0.46
PRPF8-215ENST00000576958 TCRBV5S1A1TA0A578 114 aa12.18□□□□□ -0.46
PRPF8-215ENST00000576958 TTC24A2A3L6 582 aaPredicted RBP12.18□□□□□ -0.46
PRPF8-215ENST00000576958 EME2A4GXA9 379 aaPredicted RBP12.18□□□□□ -0.46
PRPF8-215ENST00000576958 YY2O15391 372 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms