RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 RPS9P46781 194 aaKnown RBP13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 DACT2Q5SW24 774 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 PDZK1Q5T2W1 519 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 RNF19BQ6ZMZ0 732 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 KCTD8Q6ZWB6 473 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 NT5DC4Q86YG4 428 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 C12orf29Q8N999 325 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 EPB41L4BQ9H329 900 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 BTRCQ9Y297 605 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 IGKV6D-41A0A0C4DH26 115 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 PRR23D1E9PI22 279 aaPredicted RBP13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 CST1P01037 141 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 PRR23D2P0DMB1 279 aaPredicted RBP13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 CKMT2P17540 419 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 PAGE2Q7Z2X7 111 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 PARP8Q8N3A8 854 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 LZTR1Q8N653 840 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 TFAP2BQ92481 460 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 HSFY1Q96LI6 401 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 CSPG4P5Q96PW8 444 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 LIN28AQ9H9Z2 209 aaKnown RBP13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 FANCEQ9HB96 536 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 ARHGAP28Q9P2N2 729 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 DUSP12Q9UNI6 340 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 CENPXA8MT69 81 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 CPSF4O95639 269 aaKnown RBP13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 CCNE2O96020 404 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 COL6A2P12110 1019 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 MAPK1P28482 360 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 RECQLP46063 649 aaPredicted RBP13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 TUBP50607 506 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 CDH15P55291 814 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 CDK18Q07002 472 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 ILF2Q12905 390 aaKnown RBP13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 PRKG2Q13237 762 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 MAD2L1Q13257 205 aaPredicted RBP13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 DDX39BQ13838 428 aaKnown RBP13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 FSTL4Q6MZW2 842 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 TATDN1Q6P1N9 297 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 POTEHQ6S545 545 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 ZYG11AQ6WRX3 759 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 THAP5Q7Z6K1 395 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 RSPH1Q8WYR4 309 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 HTRA1Q92743 480 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 OTUB1Q96FW1 271 aaPredicted RBP13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 TRMOQ9BU70 441 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 TRIM39Q9HCM9 518 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 LRFN2Q9ULH4 789 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 GMPPBQ9Y5P6 360 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 GMEB1Q9Y692 573 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 TK2O00142 265 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 AZIN1O14977 448 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 DYNC1LI2O43237 492 aaPredicted RBP13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 GCATO75600 419 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 ANXA6P08133 673 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 NR4A1P22736 598 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 LY6KQ17RY6 165 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 AADATQ8N5Z0 425 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 MCFD2Q8NI22 146 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 PROX1Q92786 737 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 PLEKHA8Q96JA3 519 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 PCDHAC1Q9H158 963 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 CDT1Q9H211 546 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 EHD3Q9NZN3 535 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 SYNDIG1LA6NDD5 238 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 EFCAB10A6NFE3 127 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 BTN3A1O00481 513 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 T-ENOLP0DO92 83 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 INSRRP14616 1297 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 NUMBP49757 651 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 FSCN1Q16658 493 aaKnown RBP13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 TTLL9Q3SXZ7 439 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 ZBED5Q49AG3 693 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 STYK1Q6J9G0 422 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 ADGRG6Q86SQ4 1221 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 ATP6V0D2Q8N8Y2 350 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 STAG3L4Q8TBR4 150 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 TAMM41Q96BW9 452 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 BORCS6Q96GS4 357 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 CINPQ9BW66 212 aaPredicted RBP13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 RHOBTB2Q9BYZ6 727 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 PCDHAC2Q9Y5I4 1007 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 DUOX1Q9NRD9 1551 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 CDK9P50750 372 aaKnown RBP13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 VPS72Q15906 364 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 TIMM50Q3ZCQ8 353 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 IL23RQ5VWK5 629 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 REP15Q6BDI9 236 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 IL27RAQ6UWB1 636 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 UNC93AQ86WB7 457 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 AGBL3Q8NEM8 1001 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 ENKURQ8TC29 256 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 SPPL2AQ8TCT8 520 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 DQX1Q8TE96 717 aaKnown RBP13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 PHF21AQ96BD5 680 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 PKP2Q99959 881 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 TKTL2Q9H0I9 626 aa13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 WRAP73Q9P2S5 460 aaPredicted RBP13.22□□□□□ -0.29
PCDHGB3-201ENST00000576222 OR12D3Q9UGF7 316 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms